RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SIX2Q9NPC8 291 aa24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 NAGPAQ9UK23 515 aa24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 FRMD4BQ9Y2L6 1034 aa24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 GFPT2O94808 682 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 FERP16591 822 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 TNFRSF8P28908 595 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 MCF2L2Q86YR7 1114 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 BCAS3Q9H6U6 928 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 STIM2Q9P246 746 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 FAN1Q9Y2M0 1017 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 ARHGEF35A5YM69 484 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 ZBTB39O15060 712 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 MYBPC2Q14324 1141 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 PPP2R5AQ15172 486 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 ZC2HC1CQ53FD0 456 aaPredicted RBP24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 ALKBH5Q6P6C2 394 aaKnown RBP24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 RBM46Q8TBY0 533 aaKnown RBP24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 LXNQ9BS40 222 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 DMAC2Q9NW81 257 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 INTUQ9ULD6 942 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 CCPG1Q9ULG6 757 aa24.32■■□□□ 1.48
NKX2-1-201ENST00000354822 POLD1P28340 1107 aa24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 MATR3P43243 847 aaKnown RBP eCLIP24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 ODR4Q5SWX8 454 aa24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 C8orf74Q6P047 294 aa24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 SLC30A10Q6XR72 485 aa24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 PKNOX2Q96KN3 472 aa24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 PACSIN1Q9BY11 444 aa24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 FBXO28Q9NVF7 368 aa24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 CALCOCO1Q9P1Z2 691 aa24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 PGAP2Q9UHJ9 254 aa24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 DMGDHQ9UI17 866 aaKnown RBP24.31■■□□□ 1.48
NKX2-1-201ENST00000354822 STAT1P42224 750 aa24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 GYS2P54840 703 aa24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 CIAPIN1Q6FI81 312 aa24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 PRPF38AQ8NAV1 312 aaKnown RBP24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 MAP3K20Q9NYL2 800 aaKnown RBP24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 MYBL2P10244 700 aa24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 DALRD3Q5D0E6 543 aaKnown RBP24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 SLC9A9Q8IVB4 645 aa24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 SAMD3Q8N6K7 520 aa24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 LMBR1Q8WVP7 490 aa24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 TAF4BQ92750 862 aa24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 AGPAT3Q9NRZ7 376 aa24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 WRAP73Q9P2S5 460 aaPredicted RBP24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 RPTORQ8N122 1335 aa24.3■■□□□ 1.48
NKX2-1-201ENST00000354822 LOXHD1Q8IVV2 1947 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 FTCDO95954 541 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 GHRHRQ02643 423 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 EMBQ6PCB8 327 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 SAMD1Q6SPF0 538 aaPredicted RBP24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 HDAC7Q8WUI4 952 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 LPAR1Q92633 364 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 RBM12Q9NTZ6 932 aaKnown RBP24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 FER1L6Q2WGJ9 1857 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 A0A0A6YYK5 440 aaPredicted RBP24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 SYF2O95926 243 aaKnown RBP24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 P4HBP07237 508 aaKnown RBP24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 CCDC172P0C7W6 258 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 MAPTP10636 758 aaKnown RBP24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 FMO5P49326 533 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 EPHB4P54760 987 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 ALCAMQ13740 583 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 RPS6KA1Q15418 735 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 MIER3Q7Z3K6 550 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 GOLGA6L1Q8N7Z2 621 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 STRA6Q9BX79 667 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 STK33Q9BYT3 514 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 NENFQ9UMX5 172 aa24.29■■□□□ 1.48
NKX2-1-201ENST00000354822 WDR46O15213 610 aaKnown RBP24.28■■□□□ 1.48
NKX2-1-201ENST00000354822 ITGB5P18084 799 aa24.28■■□□□ 1.48
NKX2-1-201ENST00000354822 IFT20Q8IY31 132 aa24.28■■□□□ 1.48
NKX2-1-201ENST00000354822 MS4A14Q96JA4 679 aa24.28■■□□□ 1.48
NKX2-1-201ENST00000354822 PBKQ96KB5 322 aa24.28■■□□□ 1.48
NKX2-1-201ENST00000354822 AGBL1Q96MI9 1066 aa24.28■■□□□ 1.48
NKX2-1-201ENST00000354822 GLIS2Q9BZE0 524 aaPredicted RBP24.28■■□□□ 1.48
NKX2-1-201ENST00000354822 TAOK3Q9H2K8 898 aa24.28■■□□□ 1.48
NKX2-1-201ENST00000354822 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.28■■□□□ 1.48
NKX2-1-201ENST00000354822 ZBTB7AO95365 584 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 INPP5BP32019 993 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 LMAN1P49257 510 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 CDAN1Q8IWY9 1227 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 KCNH7Q9NS40 1196 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 GINM1Q9NU53 330 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 ZNF536O15090 1300 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 ZC3H4Q9UPT8 1303 aaKnown RBP24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 WNT10BO00744 389 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 H2AFZP0C0S5 128 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 H2AFVQ71UI9 128 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 SYCP3Q8IZU3 236 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 BANK1Q8NDB2 785 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 TMEM174Q8WUU8 243 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 JDP2Q8WYK2 163 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 ZNF341Q9BYN7 854 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 SMARCAL1Q9NZC9 954 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 EHD2Q9NZN4 543 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 LARSQ9P2J5 1176 aaKnown RBP24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 PNMA2Q9UL42 364 aa24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 RBBP6Q7Z6E9 1792 aaKnown RBP24.27■■□□□ 1.48
NKX2-1-201ENST00000354822 HIP1RO75146 1068 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms