RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 NFIL3Q16649 462 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 AADACL2Q6P093 401 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 LRIG3Q6UXM1 1119 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 RDH13Q8NBN7 331 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 SPAG5Q96R06 1193 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 CCT8L2Q96SF2 557 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 REEP2Q9BRK0 252 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 TRIM51Q9BSJ1 452 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 SYT11Q9BT88 431 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 TMBIM4Q9HC24 238 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 USP40Q9NVE5 1235 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 VAV3Q9UKW4 847 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 RBBP6Q7Z6E9 1792 aaKnown RBP10.47□□□□□ -0.73
RPE-201ENST00000354506 TMEM110-MUSTN1A8MSY1 372 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 FAM86B1E9PN63 330 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 SLC16A3O15427 465 aaKnown RBP10.47□□□□□ -0.73
RPE-201ENST00000354506 FAM86B2P0C5J1 330 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 GUCY2CP25092 1073 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 POU5F1Q01860 360 aaKnown RBP10.47□□□□□ -0.73
RPE-201ENST00000354506 KCNA1Q09470 495 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 ZFPM1Q8IX07 1006 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 ZNF473Q8WTR7 871 aaKnown RBP10.47□□□□□ -0.73
RPE-201ENST00000354506 DCAF4Q8WV16 495 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 SLC35C1Q96A29 364 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 HES6Q96HZ4 224 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 ATP6V1G3Q96LB4 118 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 MLXIPLQ9NP71 852 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 NOVA2Q9UNW9 492 aaKnown RBP10.47□□□□□ -0.73
RPE-201ENST00000354506 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.47□□□□□ -0.73
RPE-201ENST00000354506 NR2E1Q9Y466 385 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 PCDHA1Q9Y5I3 950 aa10.47□□□□□ -0.73
RPE-201ENST00000354506 RIMBP2O15034 1052 aa10.46□□□□□ -0.73
RPE-201ENST00000354506 TGFB1I1O43294 461 aa10.46□□□□□ -0.73
RPE-201ENST00000354506 POLD1P28340 1107 aa10.46□□□□□ -0.73
RPE-201ENST00000354506 CTNNA1P35221 906 aaKnown RBP10.46□□□□□ -0.73
RPE-201ENST00000354506 ARHGAP4P98171 946 aa10.46□□□□□ -0.73
RPE-201ENST00000354506 RPS6KA1Q15418 735 aa10.46□□□□□ -0.73
RPE-201ENST00000354506 KCTD17Q8N5Z5 321 aa10.46□□□□□ -0.73
RPE-201ENST00000354506 METTL13Q8N6R0 699 aa10.46□□□□□ -0.73
RPE-201ENST00000354506 CCDC17Q96LX7 622 aa10.46□□□□□ -0.73
RPE-201ENST00000354506 EPN3Q9H201 632 aa10.46□□□□□ -0.73
RPE-201ENST00000354506 NYAP2Q9P242 653 aa10.46□□□□□ -0.73
RPE-201ENST00000354506 SUCLA2Q9P2R7 463 aaPredicted RBP10.46□□□□□ -0.73
RPE-201ENST00000354506 ARMCX3Q9UH62 379 aaPredicted RBP10.46□□□□□ -0.73
RPE-201ENST00000354506 TTC7AQ9ULT0 858 aaPredicted RBP10.46□□□□□ -0.73
RPE-201ENST00000354506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.46□□□□□ -0.74
RPE-201ENST00000354506 DDX3XO00571 662 aaKnown RBP eCLIP10.46□□□□□ -0.746e-10■■■□□ 15.3
RPE-201ENST00000354506 RPSAP08865 295 aaKnown RBP10.46□□□□□ -0.74
RPE-201ENST00000354506 CDC25CP30307 473 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 SREBF1P36956 1147 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 IFNAR2P48551 515 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 PABPC4Q13310 644 aaKnown RBP eCLIP10.46□□□□□ -0.74
RPE-201ENST00000354506 CUL1Q13616 776 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 EXOC3L4Q17RC7 722 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 TATDN1Q6P1N9 297 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 ALKBH5Q6P6C2 394 aaKnown RBP10.46□□□□□ -0.74
RPE-201ENST00000354506 YTHDF3Q7Z739 585 aaKnown RBP10.46□□□□□ -0.74
RPE-201ENST00000354506 TAF4BQ92750 862 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 GPR88Q9GZN0 384 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 TYW1Q9NV66 732 aaKnown RBP10.46□□□□□ -0.74
RPE-201ENST00000354506 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 STK24Q9Y6E0 443 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 ZMYM2Q9UBW7 1377 aa10.46□□□□□ -0.74
RPE-201ENST00000354506 HMGB1P1B2RPK0 211 aaPredicted RBP10.45□□□□□ -0.74
RPE-201ENST00000354506 POLRMTO00411 1230 aaKnown RBP10.45□□□□□ -0.74
RPE-201ENST00000354506 TTI1O43156 1089 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 HSD17B3P37058 310 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 CACNB3P54284 484 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 TNNC1P63316 161 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 DDR1Q08345 913 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 NFIAQ12857 509 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 SLC15A2Q16348 729 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 CCDC38Q502W7 563 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 MCTP2Q6DN12 878 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 MAEAQ7L5Y9 396 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 NT5DC3Q86UY8 548 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 SFR1Q86XK3 245 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 TBC1D31Q96DN5 1066 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 FAM20AQ96MK3 541 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.45□□□□□ -0.74
RPE-201ENST00000354506 POLR3CQ9BUI4 534 aaPredicted RBP10.45□□□□□ -0.74
RPE-201ENST00000354506 MRIQ9BWK5 157 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 DNAJC17Q9NVM6 304 aaKnown RBP10.45□□□□□ -0.74
RPE-201ENST00000354506 GGA2Q9UJY4 613 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 ATP8A1Q9Y2Q0 1164 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 CALUO43852 315 aaPredicted RBP10.45□□□□□ -0.74
RPE-201ENST00000354506 CYP3A4P08684 503 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 EEF2P13639 858 aaKnown RBP10.45□□□□□ -0.74
RPE-201ENST00000354506 FNTAP49354 379 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 CASP4P49662 377 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 NLRP14Q86W24 1093 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 CCDC114Q96M63 670 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 FIZ1Q96SL8 496 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 METTL14Q9HCE5 456 aaKnown RBP10.45□□□□□ -0.74
RPE-201ENST00000354506 OLFML3Q9NRN5 406 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 CNOT8Q9UFF9 292 aaKnown RBP10.45□□□□□ -0.74
RPE-201ENST00000354506 DNM3Q9UQ16 869 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 GOLGA6L7A0A1B0GV03 622 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 RSPH10B2B2RC85 870 aa10.45□□□□□ -0.74
RPE-201ENST00000354506 MSH4O15457 936 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms