RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 FERP16591 822 aa24.17■■□□□ 1.46
UPF3A-201ENST00000351487 UBXN2AP68543 259 aa24.17■■□□□ 1.46
UPF3A-201ENST00000351487 NNTQ13423 1086 aa24.17■■□□□ 1.46
UPF3A-201ENST00000351487 GOLGA6L1Q8N7Z2 621 aa24.17■■□□□ 1.46
UPF3A-201ENST00000351487 HINFPQ9BQA5 517 aa24.17■■□□□ 1.46
UPF3A-201ENST00000351487 TEKT3Q9BXF9 490 aa24.17■■□□□ 1.46
UPF3A-201ENST00000351487 DMAC2Q9NW81 257 aa24.17■■□□□ 1.46
UPF3A-201ENST00000351487 INTUQ9ULD6 942 aa24.17■■□□□ 1.46
UPF3A-201ENST00000351487 GFPT2O94808 682 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 ARP10275 920 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 GUCY2CP25092 1073 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 MRPS25P82663 173 aaKnown RBP24.16■■□□□ 1.46
UPF3A-201ENST00000351487 LEKR1Q6ZMV7 388 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 FAM178BQ8IXR5 827 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 IFT20Q8IY31 132 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 NEK9Q8TD19 979 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 RIN2Q8WYP3 895 aaPredicted RBP24.16■■□□□ 1.46
UPF3A-201ENST00000351487 PACSIN2Q9UNF0 486 aaPredicted RBP24.16■■□□□ 1.46
UPF3A-201ENST00000351487 A0A0A6YYK5 440 aaPredicted RBP24.16■■□□□ 1.46
UPF3A-201ENST00000351487 CLSTN1O94985 981 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 HS2ST1Q7LGA3 356 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 LDHDQ86WU2 507 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 RIT2Q99578 217 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 TMEM59LQ9UK28 342 aa24.16■■□□□ 1.46
UPF3A-201ENST00000351487 FMO5P49326 533 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 OGFOD1Q8N543 542 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 IKZF4Q9H2S9 585 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 AGPAT3Q9NRZ7 376 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 COL4A5P29400 1685 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 KIF4AO95239 1232 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 CAP2P40123 477 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 STAT1P42224 750 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 PPP2R5AQ15172 486 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 RPS6KA1Q15418 735 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 USP38Q8NB14 1042 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 TAF4BQ92750 862 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 PSMD1Q99460 953 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 SH3GL2Q99962 352 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 LXNQ9BS40 222 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 STRA6Q9BX79 667 aa24.15■■□□□ 1.46
UPF3A-201ENST00000351487 IPO5O00410 1097 aaKnown RBP24.14■■□□□ 1.46
UPF3A-201ENST00000351487 PPP1R37O75864 691 aa24.14■■□□□ 1.46
UPF3A-201ENST00000351487 GLI1P08151 1106 aa24.14■■□□□ 1.46
UPF3A-201ENST00000351487 HSD17B4P51659 736 aa24.14■■□□□ 1.46
UPF3A-201ENST00000351487 GJB7Q6PEY0 223 aa24.14■■□□□ 1.46
UPF3A-201ENST00000351487 MXRA8Q9BRK3 442 aa24.14■■□□□ 1.46
UPF3A-201ENST00000351487 DAAM1Q9Y4D1 1078 aa24.14■■□□□ 1.46
UPF3A-201ENST00000351487 DDX3XO00571 662 aaKnown RBP eCLIP24.14■■□□□ 1.453e-7■■■■□ 19.9
UPF3A-201ENST00000351487 RAD17O75943 681 aa24.14■■□□□ 1.45
UPF3A-201ENST00000351487 HEXIM1O94992 359 aaKnown RBP24.14■■□□□ 1.45
UPF3A-201ENST00000351487 BCRP11274 1271 aa24.14■■□□□ 1.45
UPF3A-201ENST00000351487 DNA2P51530 1060 aa24.14■■□□□ 1.45
UPF3A-201ENST00000351487 COG2Q14746 738 aa24.14■■□□□ 1.45
UPF3A-201ENST00000351487 ODR4Q5SWX8 454 aa24.14■■□□□ 1.45
UPF3A-201ENST00000351487 ZNF772Q68DY9 489 aaPredicted RBP24.14■■□□□ 1.45
UPF3A-201ENST00000351487 FAM83AQ86UY5 434 aa24.14■■□□□ 1.45
UPF3A-201ENST00000351487 SLC9A9Q8IVB4 645 aa24.14■■□□□ 1.45
UPF3A-201ENST00000351487 TPCN2Q8NHX9 752 aa24.14■■□□□ 1.45
UPF3A-201ENST00000351487 OLIG1Q8TAK6 271 aa24.14■■□□□ 1.45
UPF3A-201ENST00000351487 PBKQ96KB5 322 aa24.14■■□□□ 1.45
UPF3A-201ENST00000351487 F8VZ95 297 aa24.13■■□□□ 1.45
UPF3A-201ENST00000351487 H2AFZP0C0S5 128 aa24.13■■□□□ 1.45
UPF3A-201ENST00000351487 ZYXQ15942 572 aaKnown RBP24.13■■□□□ 1.45
UPF3A-201ENST00000351487 ALS2CLQ60I27 953 aa24.13■■□□□ 1.45
UPF3A-201ENST00000351487 H2AFVQ71UI9 128 aa24.13■■□□□ 1.45
UPF3A-201ENST00000351487 MTMR14Q8NCE2 650 aa24.13■■□□□ 1.45
UPF3A-201ENST00000351487 FBXO28Q9NVF7 368 aa24.13■■□□□ 1.45
UPF3A-201ENST00000351487 CWC15Q9P013 229 aaKnown RBP24.13■■□□□ 1.45
UPF3A-201ENST00000351487 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.13■■□□□ 1.45
UPF3A-201ENST00000351487 FRMD4BQ9Y2L6 1034 aa24.13■■□□□ 1.45
UPF3A-201ENST00000351487 RPTORQ8N122 1335 aa24.13■■□□□ 1.45
UPF3A-201ENST00000351487 ZBTB48P10074 688 aaPredicted RBP24.12■■□□□ 1.45
UPF3A-201ENST00000351487 SOX5P35711 763 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 MAPK7Q13164 816 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 PAK2Q13177 524 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 MYBPC2Q14324 1141 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 SLFN11Q7Z7L1 901 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 CDAN1Q8IWY9 1227 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 RTKN2Q8IZC4 609 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 STK33Q9BYT3 514 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 IVLP07476 585 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 PTGER2P43116 358 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 NPEPPSP55786 919 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 TNNC1P63316 161 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 FMNL3Q8IVF7 1028 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 KSR1Q8IVT5 923 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 TSEN2Q8NCE0 465 aaKnown RBP24.12■■□□□ 1.45
UPF3A-201ENST00000351487 SLC30A5Q8TAD4 765 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 ACTRT1Q8TDG2 376 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 TMEM39BQ9GZU3 492 aa24.12■■□□□ 1.45
UPF3A-201ENST00000351487 ARHGEF35A5YM69 484 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 KCNK3O14649 394 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 EVI5O60447 810 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 ICAM1P05362 532 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 NOP2P46087 812 aaKnown RBP24.11■■□□□ 1.45
UPF3A-201ENST00000351487 DAW1Q8N136 415 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 KRT12Q99456 494 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 GLIS2Q9BZE0 524 aaPredicted RBP24.11■■□□□ 1.45
UPF3A-201ENST00000351487 VEZTQ9HBM0 779 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 ITGB5P18084 799 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms