RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 LOC102724159A0A0B4J2E5 919 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 EFCAB8A8MWE9 144 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 BIN1O00499 593 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 CCDC172P0C7W6 258 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 CCZ1BP86790 482 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 CCZ1P86791 482 aaPredicted RBP8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 PWP2Q15269 919 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 ZRSR1Q15695 479 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 STX1AQ16623 288 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 ERCC6LQ2NKX8 1250 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 CCDC144BQ3MJ40 725 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 TIGD5Q53EQ6 642 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 SLCO6A1Q86UG4 719 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 CRACR2BQ8N4Y2 399 aaPredicted RBP8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 OXR1Q8N573 874 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 DDX17Q92841 729 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 LRRC59Q96AG4 307 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 SGSM3Q96HU1 749 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 TTC14Q96N46 770 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 LGR4Q9BXB1 951 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 NKX2-4Q9H2Z4 354 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 CYP26B1Q9NR63 512 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 MTMR6Q9Y217 621 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 CEP83Q9Y592 693 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 MRC1P22897 1456 aa8.77□□□□□ -1.01
UBE2D3-204ENST00000349311 UBR2Q8IWV8 1755 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 ITGB4P16144 1822 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 PDPK1O15530 556 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 TBX1O43435 398 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 CPP00450 1065 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 SCG5P05408 212 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 CD3EP07766 207 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 GSTM1P09488 218 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 CASTP20810 708 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 USP8P40818 1118 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 AMPD2Q01433 879 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 SMC1AQ14683 1233 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 PLEKHO1Q53GL0 409 aaPredicted RBP8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 MCTP2Q6DN12 878 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 GTF2IRD2BQ6EKJ0 949 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 GTF2IRD2Q86UP8 949 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 MSL3Q8N5Y2 521 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 OSBPL5Q9H0X9 879 aaPredicted RBP8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 STAP2Q9UGK3 403 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 DNAI1Q9UI46 699 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 WDR17Q8IZU2 1322 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 SALL3Q9BXA9 1300 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 LAMB4A4D0S4 1761 aa8.76□□□□□ -1.01
UBE2D3-204ENST00000349311 A0A1W2PQ45 241 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 A0A1W2PQU0 124 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 A0A1W2PQY0 241 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 USP27XA6NNY8 438 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 GJB2P29033 226 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 SNX17Q15036 470 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 SV2CQ496J9 727 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 SYTL4Q96C24 671 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 PTCHD1Q96NR3 888 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 CEP89Q96ST8 783 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 CDADC1Q9BWV3 514 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 UPF3BQ9BZI7 483 aaKnown RBP8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 DONSONQ9NYP3 566 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 ZMYM5Q9UJ78 669 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
UBE2D3-204ENST00000349311 CCDC196A0A1B0GTZ2 297 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 VPS37CA5D8V6 355 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 BECN2A8MW95 431 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 NOP56O00567 594 aaKnown RBP8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 PSPNO60542 156 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 TOM1O60784 492 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 TADA3O75528 432 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 USP2O75604 605 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 EIF3JO75822 258 aaKnown RBP8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 KCNH1O95259 989 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 LMAN1P49257 510 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 AK2P54819 239 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 ST5P78524 1137 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 IQCB1Q15051 598 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 TESK1Q15569 626 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 EEF1DP3Q658K8 133 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 CYP2R1Q6VVX0 501 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 MMS22LQ6ZRQ5 1243 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 NLRX1Q86UT6 975 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 EFCAB13Q8IY85 973 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 MYLIPQ8WY64 445 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 ZBTB9Q96C00 473 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 LTV1Q96GA3 475 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 KIRREL1Q96J84 757 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 PPP1R13BQ96KQ4 1090 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 TACO1Q9BSH4 297 aaKnown RBP8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 TM6SF1Q9BZW5 370 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 LRRCC1Q9C099 1032 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 NAT10Q9H0A0 1025 aaKnown RBP8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 ARFGAP3Q9NP61 516 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 GPR55Q9Y2T6 319 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 BACE2Q9Y5Z0 518 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 MEGF6O75095 1541 aa8.74□□□□□ -1.01
UBE2D3-204ENST00000349311 LRP6O75581 1613 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms