RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 AOC3Q16853 763 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 CEP55Q53EZ4 464 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 ZNF720Q7Z2F6 126 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 WDR18Q9BV38 432 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 PACSIN1Q9BY11 444 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 STK33Q9BYT3 514 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 DMAC2Q9NW81 257 aa16.89■□□□□ 0.29
TNFSF13-202ENST00000349228 HEXIM1O94992 359 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 LMNB1P20700 586 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 RFX1P22670 979 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 GUCY2CP25092 1073 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 NOP2P46087 812 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 CTTNQ14247 550 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 RRP1BQ14684 758 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 SLFN11Q7Z7L1 901 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 SLC9A9Q8IVB4 645 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 LRRC57Q8N9N7 239 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 C1orf131Q8NDD1 294 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 GDAP1L1Q96MZ0 367 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 RIT2Q99578 217 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 PRDM16Q9HAZ2 1276 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 SMARCAL1Q9NZC9 954 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 EHD2Q9NZN4 543 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 FRMD4BQ9Y2L6 1034 aa16.88■□□□□ 0.29
TNFSF13-202ENST00000349228 TBC1D12O60347 775 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 APBA3O96018 575 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 CASP4P49662 377 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 ALCAMQ13740 583 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 ENOX2Q16206 610 aaKnown RBP16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 FKBP1CQ5VVH2 108 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 TMEM174Q8WUU8 243 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 TEKT3Q9BXF9 490 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 EPB41L5Q9HCM4 733 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 SUCLA2Q9P2R7 463 aaPredicted RBP16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 FEM1BQ9UK73 627 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 KIF13BQ9NQT8 1826 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 CCDC188H7C350 402 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 CLIC2O15247 247 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 PPFIA4O75335 1185 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 GLI1P08151 1106 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 LRRC31Q6UY01 552 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 FAM43BQ6ZT52 329 aaPredicted RBP16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 CD302Q8IX05 232 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 FAM178BQ8IXR5 827 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 SPICE1Q8N0Z3 855 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 TPCN2Q8NHX9 752 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 PIGOQ8TEQ8 1089 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 SCFD2Q8WU76 684 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 VCPKMTQ9H867 229 aa16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
TNFSF13-202ENST00000349228 ZNF646O15015 1829 aaPredicted RBP16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 KCNK3O14649 394 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 MAPTP10636 758 aaKnown RBP16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 BCRP11274 1271 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 SOX5P35711 763 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 FMO5P49326 533 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 GUCY2DQ02846 1103 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 CUL1Q13616 776 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 B3GNT9Q6UX72 402 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 KRT12Q99456 494 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 ZNF577Q9BSK1 485 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 ZBTB21Q9ULJ3 1066 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 ZMYM2Q9UBW7 1377 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 BRWD3Q6RI45 1802 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 NMT1P30419 496 aaKnown RBP16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 CLUL1Q15846 466 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 CFAP58Q5T655 872 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 NIPA1Q7RTP0 329 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 SLC30A5Q8TAD4 765 aa16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 RIN2Q8WYP3 895 aaPredicted RBP16.86■□□□□ 0.29
TNFSF13-202ENST00000349228 MYH10P35580 1976 aa16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 PGRMC1O00264 195 aaKnown RBP16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 PPIP5K2O43314 1243 aa16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 ECE1P42892 770 aa16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 RSBN1LQ6PCB5 846 aaPredicted RBP16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 PEX26Q7Z412 305 aa16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 IQCKQ8N0W5 287 aa16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 RASGEF1CQ8N431 466 aa16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 FIZ1Q96SL8 496 aa16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 AGPAT3Q9NRZ7 376 aa16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 ZNF70Q9UC06 446 aaPredicted RBP16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 SCN9AQ15858 1988 aa16.85■□□□□ 0.29
TNFSF13-202ENST00000349228 ARHGEF35A5YM69 484 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 SFI1A8K8P3 1242 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 DDX3XO00571 662 aaKnown RBP eCLIP16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 CARSP49589 748 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 SKOR1P84550 965 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 KCNA1Q09470 495 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 TNIP1Q15025 636 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 DLGAP5Q15398 846 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 ODR4Q5SWX8 454 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 ACER1Q8TDN7 264 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 MXRA8Q9BRK3 442 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 STRA6Q9BX79 667 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 ISCUQ9H1K1 167 aa16.84■□□□□ 0.29
TNFSF13-202ENST00000349228 TAF1DQ9H5J8 278 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms