RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SH2B2O14492 632 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 CCND2P30279 289 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 TUBA4AP68366 448 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 CCNA1P78396 465 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 IL9RQ01113 521 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 TFDP1Q14186 410 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 LGSNQ5TDP6 509 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 TTBK2Q6IQ55 1244 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 MIS18BP1Q6P0N0 1132 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 DDHD1Q8NEL9 900 aa11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 SH3RF3Q8TEJ3 882 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 RNF26Q9BY78 433 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 FOXP1Q9H334 677 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 RPAP3Q9H6T3 665 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 ABT1Q9ULW3 272 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-202ENST00000348513 SYCE1LA8MT33 242 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 H0YCG3 227 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 LRRN2O75325 713 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 SYF2O95926 243 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 ARPP19P56211 112 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 CEP55Q53EZ4 464 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 TRAF7Q6Q0C0 670 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 SEL1LQ9UBV2 794 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 FHOD1Q9Y613 1164 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 KDM5CP41229 1560 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 ANKARQ7Z5J8 1434 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 THAP12O43422 761 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 ATP6V1G1O75348 118 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 CYP2D6P10635 497 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 PDHBP11177 359 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 CASP14P31944 242 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 PMS1P54277 932 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 MESDQ14696 234 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 BEND6Q5SZJ8 279 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 NUGGCQ68CJ6 796 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 SLC7A3Q8WY07 619 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 TUBGCP2Q9BSJ2 902 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 MTA3Q9BTC8 594 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 POLE3Q9NRF9 147 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 MAGED2Q9UNF1 606 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 ITM2BQ9Y287 266 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 SYNMO15061 1565 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 TBKBP1A7MCY6 615 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 WBP4O75554 376 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 LARGE1O95461 756 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 NSFP46459 744 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 CDK8P49336 464 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 TUBA3CQ13748 450 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 SLC35F6Q8N357 371 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 ABHD8Q96I13 439 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 RILPQ96NA2 401 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 ATXN10Q9UBB4 475 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 KIF1BO60333 1816 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 MAPK13O15264 365 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 EIF2AK2P19525 551 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 CDC37Q16543 378 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 NDUFA5Q16718 116 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 ABI1Q8IZP0 508 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 ZNF341Q9BYN7 854 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 PI4KBQ9UBF8 816 aa11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 CAB39Q9Y376 341 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-202ENST00000348513 GOLGA8IPA6NC78 632 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 E9PMD0 336 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 DCTN3O75935 186 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 NPR1P16066 1061 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 KRT72Q14CN4 511 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 SLC39A14Q15043 492 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 TSHZ1Q6ZSZ6 1077 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 AFAP1L2Q8N4X5 818 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 ELAC2Q9BQ52 826 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 TEKT2Q9UIF3 430 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 SH3GLB1Q9Y371 365 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 POTEFA5A3E0 1075 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 FAM196BA6NMK8 535 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 E7ENQ6 273 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 ADARP55265 1226 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 AP2B1P63010 937 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 KRT76Q01546 638 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 CIAPIN1Q6FI81 312 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 METTL14Q9HCE5 456 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 NDUFA13Q9P0J0 144 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 MCAMP43121 646 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 MAGEA8P43361 318 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 MRPS25P82663 173 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 EHHADHQ08426 723 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 CBX3Q13185 183 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 PDZD8Q8NEN9 1154 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 DEAF1O75398 565 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 PLEKHA8P1O95397 391 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 MMP1P03956 469 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 IFNAR2P48551 515 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 TFAMQ00059 246 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 EMBQ6PCB8 327 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 KLHL25Q9H0H3 589 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 BTBD7Q9P203 1132 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 SEPT3Q9UH03 358 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 PACSIN2Q9UNF0 486 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 TRIM17Q9Y577 477 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms