RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 IGSF9BQ9UPX0 1349 aa12.89□□□□□ -0.35
APP-201ENST00000346798 GOLGA6L7A0A1B0GV03 622 aa12.89□□□□□ -0.35
APP-201ENST00000346798 PHF20L1A8MW92 1017 aa12.89□□□□□ -0.35
APP-201ENST00000346798 MSH4O15457 936 aa12.89□□□□□ -0.35
APP-201ENST00000346798 DRAP1Q14919 205 aaPredicted RBP12.89□□□□□ -0.35
APP-201ENST00000346798 QPCTQ16769 361 aa12.89□□□□□ -0.35
APP-201ENST00000346798 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
APP-201ENST00000346798 PALB2Q86YC2 1186 aa12.89□□□□□ -0.35
APP-201ENST00000346798 SYT2Q8N9I0 419 aaPredicted RBP12.89□□□□□ -0.35
APP-201ENST00000346798 LNX1Q8TBB1 728 aaPredicted RBP12.89□□□□□ -0.35
APP-201ENST00000346798 DNAJC18Q9H819 358 aa12.89□□□□□ -0.35
APP-201ENST00000346798 PLCB1Q9NQ66 1216 aa12.89□□□□□ -0.35
APP-201ENST00000346798 TMEM59LQ9UK28 342 aa12.89□□□□□ -0.35
APP-201ENST00000346798 DNAJC12Q9UKB3 198 aa12.89□□□□□ -0.35
APP-201ENST00000346798 BZW2Q9Y6E2 419 aaKnown RBP12.89□□□□□ -0.35
APP-201ENST00000346798 DDTLA6NHG4 134 aaPredicted RBP12.88□□□□□ -0.35
APP-201ENST00000346798 CFBP00751 764 aa12.88□□□□□ -0.35
APP-201ENST00000346798 PLTPP55058 493 aa12.88□□□□□ -0.35
APP-201ENST00000346798 CUL1Q13616 776 aa12.88□□□□□ -0.35
APP-201ENST00000346798 MICALCLQ6ZW33 695 aa12.88□□□□□ -0.35
APP-201ENST00000346798 CCDC26Q8TAB7 109 aa12.88□□□□□ -0.35
APP-201ENST00000346798 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
APP-201ENST00000346798 CYFIP2Q96F07 1278 aa12.88□□□□□ -0.35
APP-201ENST00000346798 EIF2AK1Q9BQI3 630 aaKnown RBP12.88□□□□□ -0.35
APP-201ENST00000346798 CCDC113Q9H0I3 377 aa12.88□□□□□ -0.35
APP-201ENST00000346798 SIX2Q9NPC8 291 aa12.88□□□□□ -0.35
APP-201ENST00000346798 TYW1Q9NV66 732 aaKnown RBP12.88□□□□□ -0.35
APP-201ENST00000346798 WNK3Q9BYP7 1800 aa12.88□□□□□ -0.35
APP-201ENST00000346798 DDX39AO00148 427 aaKnown RBP12.88□□□□□ -0.35
APP-201ENST00000346798 CPP00450 1065 aa12.88□□□□□ -0.35
APP-201ENST00000346798 RPA1P27694 616 aa12.88□□□□□ -0.35
APP-201ENST00000346798 ICA1Q05084 483 aa12.88□□□□□ -0.35
APP-201ENST00000346798 SPIRE1Q08AE8 756 aa12.88□□□□□ -0.35
APP-201ENST00000346798 ZNF746Q6NUN9 644 aaPredicted RBP12.88□□□□□ -0.35
APP-201ENST00000346798 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
APP-201ENST00000346798 ACTRT1Q8TDG2 376 aa12.88□□□□□ -0.35
APP-201ENST00000346798 LMBR1Q8WVP7 490 aa12.88□□□□□ -0.35
APP-201ENST00000346798 CTNNBL1Q8WYA6 563 aaPredicted RBP12.88□□□□□ -0.35
APP-201ENST00000346798 SELENOSQ9BQE4 189 aa12.88□□□□□ -0.35
APP-201ENST00000346798 SH2D3AQ9BRG2 576 aa12.88□□□□□ -0.35
APP-201ENST00000346798 TRAF3IP3Q9Y228 551 aa12.88□□□□□ -0.35
APP-201ENST00000346798 SNX24Q9Y343 169 aa12.88□□□□□ -0.35
APP-201ENST00000346798 PDXKO00764 312 aa12.87□□□□□ -0.35
APP-201ENST00000346798 FBXO11Q86XK2 927 aa12.87□□□□□ -0.35
APP-201ENST00000346798 TEKT1Q969V4 418 aa12.87□□□□□ -0.35
APP-201ENST00000346798 ARHGEF26Q96DR7 871 aa12.87□□□□□ -0.35
APP-201ENST00000346798 CABS1Q96KC9 395 aa12.87□□□□□ -0.35
APP-201ENST00000346798 AMNQ9BXJ7 453 aa12.87□□□□□ -0.35
APP-201ENST00000346798 SWAP70Q9UH65 585 aa12.87□□□□□ -0.35
APP-201ENST00000346798 SMCHD1A6NHR9 2005 aa12.87□□□□□ -0.35
APP-201ENST00000346798 PITPNM2Q9BZ72 1349 aa12.87□□□□□ -0.35
APP-201ENST00000346798 F5H6K3 240 aa12.87□□□□□ -0.35
APP-201ENST00000346798 PPEF1O14829 653 aaPredicted RBP12.87□□□□□ -0.35
APP-201ENST00000346798 BBOX1O75936 387 aa12.87□□□□□ -0.35
APP-201ENST00000346798 GYS1P13807 737 aa12.87□□□□□ -0.35
APP-201ENST00000346798 SLCO1A2P46721 670 aa12.87□□□□□ -0.35
APP-201ENST00000346798 KLRC3Q07444 240 aa12.87□□□□□ -0.35
APP-201ENST00000346798 DPY19L2P1Q6NXN4 242 aa12.87□□□□□ -0.35
APP-201ENST00000346798 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
APP-201ENST00000346798 CPLX4Q7Z7G2 160 aa12.87□□□□□ -0.35
APP-201ENST00000346798 ARFGAP2Q8N6H7 521 aa12.87□□□□□ -0.35
APP-201ENST00000346798 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
APP-201ENST00000346798 PCIF1Q9H4Z3 704 aa12.87□□□□□ -0.35
APP-201ENST00000346798 A6NNZ2 444 aa12.87□□□□□ -0.35
APP-201ENST00000346798 FAM107AO95990 144 aa12.87□□□□□ -0.35
APP-201ENST00000346798 TUBB8Q3ZCM7 444 aa12.87□□□□□ -0.35
APP-201ENST00000346798 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
APP-201ENST00000346798 CBWD3Q5JTY5 395 aa12.87□□□□□ -0.35
APP-201ENST00000346798 CBWD5Q5RIA9 395 aa12.87□□□□□ -0.35
APP-201ENST00000346798 C10orf76Q5T2E6 689 aa12.87□□□□□ -0.35
APP-201ENST00000346798 ARHGAP27Q6ZUM4 889 aa12.87□□□□□ -0.35
APP-201ENST00000346798 C15orf52Q6ZUT6 534 aaKnown RBP12.87□□□□□ -0.35
APP-201ENST00000346798 SYCP3Q8IZU3 236 aa12.87□□□□□ -0.35
APP-201ENST00000346798 DYDC2Q96IM9 177 aa12.87□□□□□ -0.35
APP-201ENST00000346798 JPH2Q9BR39 696 aaPredicted RBP12.87□□□□□ -0.35
APP-201ENST00000346798 THAP2Q9H0W7 228 aa12.87□□□□□ -0.35
APP-201ENST00000346798 ERVK-5Q9HDB9 667 aa12.87□□□□□ -0.35
APP-201ENST00000346798 FRMD3A2A2Y4 597 aa12.86□□□□□ -0.35
APP-201ENST00000346798 GMNCA6NCL1 334 aa12.86□□□□□ -0.35
APP-201ENST00000346798 H0YGN5 161 aa12.86□□□□□ -0.35
APP-201ENST00000346798 TGFB1I1O43294 461 aa12.86□□□□□ -0.35
APP-201ENST00000346798 PPP1R12BO60237 982 aaPredicted RBP12.86□□□□□ -0.35
APP-201ENST00000346798 TNFAIP3P21580 790 aa12.86□□□□□ -0.35
APP-201ENST00000346798 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
APP-201ENST00000346798 RUFY4Q6ZNE9 571 aa12.86□□□□□ -0.35
APP-201ENST00000346798 CD302Q8IX05 232 aa12.86□□□□□ -0.35
APP-201ENST00000346798 HOOK2Q96ED9 719 aa12.86□□□□□ -0.35
APP-201ENST00000346798 CD248Q9HCU0 757 aa12.86□□□□□ -0.35
APP-201ENST00000346798 PNMA2Q9UL42 364 aa12.86□□□□□ -0.35
APP-201ENST00000346798 NFS1Q9Y697 457 aa12.86□□□□□ -0.35
APP-201ENST00000346798 GUCY2CP25092 1073 aa12.86□□□□□ -0.35
APP-201ENST00000346798 PPP2R2AP63151 447 aa12.86□□□□□ -0.35
APP-201ENST00000346798 ZYXQ15942 572 aaKnown RBP12.86□□□□□ -0.35
APP-201ENST00000346798 SPRED3Q2MJR0 410 aa12.86□□□□□ -0.35
APP-201ENST00000346798 APOBEC3HQ6NTF7 200 aaKnown RBP12.86□□□□□ -0.35
APP-201ENST00000346798 RINT1Q6NUQ1 792 aa12.86□□□□□ -0.35
APP-201ENST00000346798 CCDC174Q6PII3 467 aa12.86□□□□□ -0.35
APP-201ENST00000346798 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
APP-201ENST00000346798 LENG9Q96B70 501 aa12.86□□□□□ -0.35
APP-201ENST00000346798 ELMO3Q96BJ8 720 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms