RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 KNOP1Q1ED39 458 aaKnown RBP12.13□□□□□ -0.47
ECM1-201ENST00000346569 DUSP28Q4G0W2 176 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 ODR4Q5SWX8 454 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 FAM160B1Q5W0V3 765 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 TRMT1LQ7Z2T5 733 aaKnown RBP12.13□□□□□ -0.47
ECM1-201ENST00000346569 SPC24Q8NBT2 197 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 SPATA33Q96N06 139 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 CTAGE1Q96RT6 745 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 ST6GALNAC4Q9H4F1 302 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 DHX33Q9H6R0 707 aaKnown RBP12.13□□□□□ -0.47
ECM1-201ENST00000346569 MRPL44Q9H9J2 332 aaKnown RBP12.13□□□□□ -0.47
ECM1-201ENST00000346569 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
ECM1-201ENST00000346569 FLRT1Q9NZU1 646 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 LARSQ9P2J5 1176 aaKnown RBP12.13□□□□□ -0.47
ECM1-201ENST00000346569 ZNF236Q9UL36 1845 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 LOXHD1Q8IVV2 1947 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 KCNJ18B7U540 433 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 TEX33O43247 280 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 TGFB1I1O43294 461 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 GH1P01241 217 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 PTGS1P23219 599 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 EEF1GP26641 437 aaKnown RBP12.12□□□□□ -0.47
ECM1-201ENST00000346569 PBX1P40424 430 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 COPB1P53618 953 aaKnown RBP12.12□□□□□ -0.47
ECM1-201ENST00000346569 RTP1P59025 263 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 FKBP3Q00688 224 aaKnown RBP12.12□□□□□ -0.47
ECM1-201ENST00000346569 KCNA1Q09470 495 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 KCNJ12Q14500 433 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 EDRF1Q3B7T1 1238 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 GJC2Q5T442 439 aaPredicted RBP12.12□□□□□ -0.47
ECM1-201ENST00000346569 OLFML2BQ68BL8 750 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 LRRC55Q6ZSA7 311 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 MAEAQ7L5Y9 396 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 FILIP1Q7Z7B0 1213 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 NELFCDQ8IXH7 590 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 FAM178BQ8IXR5 827 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 DRC1Q96MC2 740 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 CFHR5Q9BXR6 569 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 C17orf75Q9HAS0 396 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 IMPACTQ9P2X3 320 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 EMSYQ7Z589 1322 aa12.12□□□□□ -0.47
ECM1-201ENST00000346569 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
ECM1-201ENST00000346569 GCNT3O95395 438 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 FGFR1OPO95684 399 aaKnown RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 ZNF865P0CJ78 1059 aaPredicted RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 HOXD8P13378 290 aaPredicted RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 SMPD1P17405 629 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 RGS2P41220 211 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 SLC26A2P50443 739 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 GTF2BQ00403 316 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 GRM1Q13255 1194 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 CCL14Q16627 93 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 NFIL3Q16649 462 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 CCDC144BQ3MJ40 725 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 ZC2HC1CQ53FD0 456 aaPredicted RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 CCDC186Q7Z3E2 898 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 VSTM4Q8IW00 320 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 DRC7Q8IY82 874 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 MCPH1Q8NEM0 835 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 PPTC7Q8NI37 304 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 SPIRE2Q8WWL2 714 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 SOCS4Q8WXH5 440 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 KIFAP3Q92845 792 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 KCNN1Q92952 543 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 EEF2KMTQ96G04 330 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 CEP63Q96MT8 703 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 TSG101Q99816 390 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 SMARCAD1Q9H4L7 1026 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 AZI2Q9H6S1 392 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 PPME1Q9Y570 386 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 GOLGA6L6A8MZA4 724 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 ZBTB42B2RXF5 422 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 NOP56O00567 594 aaKnown RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 TNPO2O14787 897 aaKnown RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 PPFIA4O75335 1185 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 XRCC5P13010 732 aaKnown RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 CYP2B6P20813 491 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 NCKAP1LP55160 1127 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 MARSP56192 900 aaKnown RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 TBX2Q13207 712 aaPredicted RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 ADAM9Q13443 819 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 ALCAMQ13740 583 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 PLCB4Q15147 1175 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 MTERF2Q49AM1 385 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 FILIP1LQ4L180 1135 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 FAM102BQ5T8I3 360 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 FAM114A1Q8IWE2 563 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 SLC17A8Q8NDX2 589 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 ATP8B4Q8TF62 1192 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 TMEM174Q8WUU8 243 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 BBXQ8WY36 941 aaPredicted RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 TRIM44Q96DX7 344 aaPredicted RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 FAM167AQ96KS9 214 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 CCDC43Q96MW1 224 aaKnown RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 VPS16Q9H269 839 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 PRDM10Q9NQV6 1147 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms