RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 HES6Q96HZ4 224 aa19.33■□□□□ 0.68
VHL-202ENST00000345392 ZNF317Q96PQ6 595 aaPredicted RBP19.33■□□□□ 0.68
VHL-202ENST00000345392 EPB41L4BQ9H329 900 aa19.33■□□□□ 0.68
VHL-202ENST00000345392 CNOT10Q9H9A5 744 aaKnown RBP19.33■□□□□ 0.68
VHL-202ENST00000345392 NOD2Q9HC29 1040 aa19.33■□□□□ 0.68
VHL-202ENST00000345392 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.33■□□□□ 0.681e-10■■■□□ 14.9
VHL-202ENST00000345392 PPP1R9AQ9ULJ8 1098 aa19.33■□□□□ 0.68
VHL-202ENST00000345392 BRWD3Q6RI45 1802 aa19.33■□□□□ 0.68
VHL-202ENST00000345392 SBF2Q86WG5 1849 aa19.33■□□□□ 0.68
VHL-202ENST00000345392 BUB1BO60566 1050 aaPredicted RBP19.32■□□□□ 0.68
VHL-202ENST00000345392 PPFIA2O75334 1257 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 GFPT2O94808 682 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 GALCP54803 685 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 PLTPP55058 493 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 IFI35P80217 286 aaPredicted RBP19.32■□□□□ 0.68
VHL-202ENST00000345392 ZNF211Q13398 564 aaPredicted RBP19.32■□□□□ 0.68
VHL-202ENST00000345392 ARSHQ5FYA8 562 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 C16orf86Q6ZW13 317 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 ZNF804AQ7Z570 1209 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 ZNF287Q9HBT7 754 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 ERVK-5Q9HDB9 667 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 AMFRQ9UKV5 643 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 CLTAP09496 248 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 ABCB4P21439 1286 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 GSTO1P78417 241 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 GRAPQ13588 217 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 FAM133BQ5BKY9 247 aaKnown RBP19.32■□□□□ 0.68
VHL-202ENST00000345392 DCAF12L1Q5VU92 463 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 PNMA8AQ86V59 439 aaPredicted RBP19.32■□□□□ 0.68
VHL-202ENST00000345392 LRRC34Q8IZ02 419 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 GRAPLQ8TC17 118 aaPredicted RBP19.32■□□□□ 0.68
VHL-202ENST00000345392 THSD7AQ9UPZ6 1657 aa19.32■□□□□ 0.68
VHL-202ENST00000345392 XRCC5P13010 732 aaKnown RBP19.31■□□□□ 0.68
VHL-202ENST00000345392 GCFC2P16383 781 aaKnown RBP19.31■□□□□ 0.68
VHL-202ENST00000345392 CLNS1AP54105 237 aaKnown RBP19.31■□□□□ 0.68
VHL-202ENST00000345392 MAGEC3Q8TD91 643 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 ELAC2Q9BQ52 826 aaKnown RBP19.31■□□□□ 0.68
VHL-202ENST00000345392 TXLNGYQ9BZA5 131 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 NT5C3AQ9H0P0 336 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 BCAS3Q9H6U6 928 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 CD209Q9NNX6 404 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 GGT7Q9UJ14 662 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 SNX24Q9Y343 169 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 DDX60LQ5H9U9 1706 aaKnown RBP19.31■□□□□ 0.68
VHL-202ENST00000345392 POTEFA5A3E0 1075 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 AKAP3O75969 853 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 POTEIP0CG38 1075 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 GHRP10912 638 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 SLC8A1P32418 973 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 CASP4P49662 377 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 PPP4CP60510 307 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 EDRF1Q3B7T1 1238 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 MFSD14BQ5SR56 506 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 POTEGQ6S5H5 508 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 POTEEQ6S8J3 1075 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 TBC1D1Q86TI0 1168 aaPredicted RBP19.31■□□□□ 0.68
VHL-202ENST00000345392 RNF25Q96BH1 459 aaPredicted RBP19.31■□□□□ 0.68
VHL-202ENST00000345392 ADAM7Q9H2U9 754 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 AZI2Q9H6S1 392 aa19.31■□□□□ 0.68
VHL-202ENST00000345392 PPP1R11O60927 126 aaPredicted RBP19.3■□□□□ 0.68
VHL-202ENST00000345392 HOXA7P31268 230 aaPredicted RBP19.3■□□□□ 0.68
VHL-202ENST00000345392 SLC16A2P36021 539 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 PRKCIP41743 596 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 IFNAR2P48551 515 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 NT5C2P49902 561 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 MRPL12P52815 198 aaKnown RBP19.3■□□□□ 0.68
VHL-202ENST00000345392 DR1Q01658 176 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 SYCE1Q8N0S2 351 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 ANKS4BQ8N8V4 417 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 SLC35G2Q8TBE7 412 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 PRMT1Q99873 361 aaKnown RBP19.3■□□□□ 0.68
VHL-202ENST00000345392 MEIS1O00470 390 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 RAD21O60216 631 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 MED24O75448 989 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 PAX7P23759 505 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 SMARCA1P28370 1054 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 HOXD13P35453 343 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 PMS2P54278 862 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 EIF3BP55884 814 aaKnown RBP19.3■□□□□ 0.68
VHL-202ENST00000345392 EPHA7Q15375 998 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 TTBK2Q6IQ55 1244 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 VPS36Q86VN1 386 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 GLYCTKQ8IVS8 523 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 ZC3H3Q8IXZ2 948 aaKnown RBP19.3■□□□□ 0.68
VHL-202ENST00000345392 ATXN2LQ8WWM7 1075 aaKnown RBP19.3■□□□□ 0.68
VHL-202ENST00000345392 P3H4Q92791 437 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 SIX2Q9NPC8 291 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 GCNT4Q9P109 453 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 NENFQ9UMX5 172 aa19.3■□□□□ 0.68
VHL-202ENST00000345392 CLIC2O15247 247 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 GBP2P32456 591 aaPredicted RBP19.29■□□□□ 0.68
VHL-202ENST00000345392 RFC4P35249 363 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 SLCO1A2P46721 670 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 RHBDL3P58872 404 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 PSMC6P62333 389 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 SLC29A2Q14542 456 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 AADACL2Q6P093 401 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 TLDC1Q6P9B6 456 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 FRMD5Q7Z6J6 570 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 HOOK3Q86VS8 718 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms