RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 METTL13Q8N6R0 699 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 PPP1R13LQ8WUF5 828 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 CALML4Q96GE6 196 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 CEP170P1Q96L14 293 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 PDLIM7Q9NR12 457 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 CHMP5Q9NZZ3 219 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 CCDC39Q9UFE4 941 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 TBX21Q9UL17 535 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 DNM3Q9UQ16 869 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 ZDHHC9Q9Y397 364 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 M0QZ92 97 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 GAS2O43903 313 aaKnown RBP13.21□□□□□ -0.29
SNCA-202ENST00000345009 DDIT3P35638 169 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 THPOP40225 353 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 RFC5P40937 340 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 ME1P48163 572 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 ADAM17P78536 824 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 ZNF200P98182 395 aaPredicted RBP13.21□□□□□ -0.29
SNCA-202ENST00000345009 DNM1Q05193 864 aaKnown RBP13.21□□□□□ -0.29
SNCA-202ENST00000345009 ZRSR1Q15695 479 aaKnown RBP13.21□□□□□ -0.29
SNCA-202ENST00000345009 IL17AQ16552 155 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 MTERF2Q49AM1 385 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 IER5Q5VY09 327 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 MTHFD1LQ6UB35 978 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 SPATA32Q96LK8 384 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 NOC4LQ9BVI4 516 aaKnown RBP13.21□□□□□ -0.29
SNCA-202ENST00000345009 FTOQ9C0B1 505 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNCA-202ENST00000345009 CYP26B1Q9NR63 512 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 KIAA1024Q9UPX6 916 aa13.21□□□□□ -0.29
SNCA-202ENST00000345009 SMIM35A0A1B0GVV1 85 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 TRIM43BA6NCK2 446 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 CUTAO60888 179 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 MED24O75448 989 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 SPATA31C1P0DKV0 1188 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 SELPP16109 830 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 POLGP54098 1239 aaPredicted RBP13.2□□□□□ -0.3
SNCA-202ENST00000345009 VARS2Q5ST30 1063 aaKnown RBP13.2□□□□□ -0.3
SNCA-202ENST00000345009 MARCH8Q5T0T0 291 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 MFSD5Q6N075 450 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 ANO5Q75V66 913 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 RPAINQ86UA6 219 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 CABP7Q86V35 215 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 RPUSD2Q8IZ73 545 aaKnown RBP13.2□□□□□ -0.3
SNCA-202ENST00000345009 TRIM43Q96BQ3 446 aaPredicted RBP13.2□□□□□ -0.3
SNCA-202ENST00000345009 SUGCTQ9HAC7 445 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 DDX19AQ9NUU7 478 aaKnown RBP13.2□□□□□ -0.3
SNCA-202ENST00000345009 FBXO2Q9UK22 296 aaPredicted RBP13.2□□□□□ -0.3
SNCA-202ENST00000345009 DBR1Q9UK59 544 aaKnown RBP13.2□□□□□ -0.3
SNCA-202ENST00000345009 RCOR1Q9UKL0 485 aa13.2□□□□□ -0.3
SNCA-202ENST00000345009 ZMYND8Q9ULU4 1186 aaPredicted RBP13.2□□□□□ -0.3
SNCA-202ENST00000345009 ARHGEF35A5YM69 484 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 MAFO75444 373 aaPredicted RBP13.19□□□□□ -0.3
SNCA-202ENST00000345009 DGAT1O75907 488 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 STBD1O95210 358 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 SYN1P17600 705 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 CDC25AP30304 524 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 RFC2P35250 354 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 RBL2Q08999 1139 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 TARBP2Q15633 366 aaKnown RBP13.19□□□□□ -0.3
SNCA-202ENST00000345009 CSPP1Q1MSJ5 1256 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 EFCAB12Q6NXP0 572 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 SH3RF1Q7Z6J0 888 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 PTCD2Q8WV60 388 aaKnown RBP13.19□□□□□ -0.3
SNCA-202ENST00000345009 TRAPPC12Q8WVT3 735 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 TCP11Q8WWU5 503 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 PPP1R12CQ9BZL4 782 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 CCSER1Q9C0I3 900 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 FAM49AQ9H0Q0 323 aaPredicted RBP13.19□□□□□ -0.3
SNCA-202ENST00000345009 CSRNP2Q9H175 543 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 WDR70Q9NW82 654 aa13.19□□□□□ -0.3
SNCA-202ENST00000345009 TNRC18O15417 2968 aaPredicted RBP13.18□□□□□ -0.3
SNCA-202ENST00000345009 PP2D1A8MPX8 630 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 RSPH10B2B2RC85 870 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 ZBTB42B2RXF5 422 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 H0YGN5 161 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 C22orf31O95567 290 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 RSPH10BP0C881 870 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 CKBP12277 381 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 CYP2C18P33260 490 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 RARRES1P49788 294 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 NPEPPSP55786 919 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 PPIGQ13427 754 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNCA-202ENST00000345009 HIC1Q14526 733 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 PLA2G4FQ68DD2 849 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 FAM43BQ6ZT52 329 aaPredicted RBP13.18□□□□□ -0.3
SNCA-202ENST00000345009 MCPH1Q8NEM0 835 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 PIGOQ8TEQ8 1089 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 DNAJB3Q8WWF6 145 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 PYM1Q9BRP8 204 aaKnown RBP13.18□□□□□ -0.3
SNCA-202ENST00000345009 WRAP73Q9P2S5 460 aaPredicted RBP13.18□□□□□ -0.3
SNCA-202ENST00000345009 AKT3Q9Y243 479 aa13.18□□□□□ -0.3
SNCA-202ENST00000345009 GOLGA6L4A6NEF3 574 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 ASAP2O43150 1006 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 EYA4O95677 639 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 PFKMP08237 780 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 IQCF3P0C7M6 154 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 CCL23P55773 120 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms