RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 C11orf16Q9NQ32 467 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 PCDHB12Q9Y5F1 795 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 TTC3P53804 2025 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 BRWD1Q9NSI6 2320 aa14.02□□□□□ -0.16
SGCA-202ENST00000344627 MYO7AQ13402 2215 aa14.02□□□□□ -0.16
SGCA-202ENST00000344627 WDR64B1ANS9 1081 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 MAGEB2O15479 319 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 HOXA2O43364 376 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 MBTPS2O43462 519 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 RPS6KA5O75582 802 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 CDKL5O76039 1030 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 SRGAP2BP0DMP2 458 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 CIITAP33076 1130 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 LTBRP36941 435 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 USP11P51784 963 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 CDC42EP1Q00587 391 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 ADAM15Q13444 863 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 TMEM266Q2M3C6 531 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 LRCH2Q5VUJ6 765 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 SLC24A5Q71RS6 500 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 EFHBQ8N7U6 833 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 SPPL3Q8TCT6 385 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 FAM167AQ96KS9 214 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 MFSD14AQ96MC6 490 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 AIFM3Q96NN9 605 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 C22orf23Q9BZE7 217 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 RGS18Q9NS28 235 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 CD207Q9UJ71 328 aa14.02□□□□□ -0.17
SGCA-202ENST00000344627 MSH4O15457 936 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 ATP4AP20648 1035 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 TMOD1P28289 359 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 CRYBB1P53674 252 aaPredicted RBP14.01□□□□□ -0.17
SGCA-202ENST00000344627 COASYQ13057 564 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 HERC4Q5GLZ8 1057 aaPredicted RBP14.01□□□□□ -0.17
SGCA-202ENST00000344627 RTN4RL1Q86UN2 441 aaPredicted RBP14.01□□□□□ -0.17
SGCA-202ENST00000344627 KIAA0319LQ8IZA0 1049 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 KHSRPQ92945 711 aaKnown RBP eCLIP14.01□□□□□ -0.17
SGCA-202ENST00000344627 GJA10Q969M2 543 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 PRRX2Q99811 253 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 TEKT3Q9BXF9 490 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 DISC1Q9NRI5 854 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 NRBP2Q9NSY0 501 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 RAPGEFL1Q9UHV5 662 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 KCNJ14Q9UNX9 436 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 LZTS1Q9Y250 596 aa14.01□□□□□ -0.17
SGCA-202ENST00000344627 MAFBQ9Y5Q3 323 aaPredicted RBP14.01□□□□□ -0.17
SGCA-202ENST00000344627 MRPL42Q9Y6G3 142 aaKnown RBP14.01□□□□□ -0.17
SGCA-202ENST00000344627 DENND3A2RUS2 1198 aa14□□□□□ -0.17
SGCA-202ENST00000344627 DTNBO60941 627 aa14□□□□□ -0.17
SGCA-202ENST00000344627 CSPG5O95196 566 aa14□□□□□ -0.17
SGCA-202ENST00000344627 VTNP04004 478 aa14□□□□□ -0.17
SGCA-202ENST00000344627 XBP1P17861 261 aa14□□□□□ -0.17
SGCA-202ENST00000344627 NDUFV1P49821 464 aa14□□□□□ -0.17
SGCA-202ENST00000344627 SCRN1Q12765 414 aa14□□□□□ -0.17
SGCA-202ENST00000344627 KIZQ2M2Z5 673 aa14□□□□□ -0.17
SGCA-202ENST00000344627 PAN2Q504Q3 1202 aaKnown RBP14□□□□□ -0.17
SGCA-202ENST00000344627 ERICH6BQ5W0A0 696 aa14□□□□□ -0.17
SGCA-202ENST00000344627 GALNT17Q6IS24 598 aa14□□□□□ -0.17
SGCA-202ENST00000344627 MIER3Q7Z3K6 550 aa14□□□□□ -0.17
SGCA-202ENST00000344627 FAM177A1Q8N128 213 aaPredicted RBP14□□□□□ -0.17
SGCA-202ENST00000344627 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
SGCA-202ENST00000344627 POF1BQ8WVV4 589 aa14□□□□□ -0.17
SGCA-202ENST00000344627 LINC01599Q8WXQ3 324 aa14□□□□□ -0.17
SGCA-202ENST00000344627 LENG9Q96B70 501 aa14□□□□□ -0.17
SGCA-202ENST00000344627 UNC45AQ9H3U1 944 aa14□□□□□ -0.17
SGCA-202ENST00000344627 CDHR5Q9HBB8 845 aa14□□□□□ -0.17
SGCA-202ENST00000344627 ERVK-5Q9HDB9 667 aa14□□□□□ -0.17
SGCA-202ENST00000344627 TMEM161AQ9NX61 479 aa14□□□□□ -0.17
SGCA-202ENST00000344627 PUF60Q9UHX1 559 aaKnown RBP14□□□□□ -0.17
SGCA-202ENST00000344627 AKT3Q9Y243 479 aa14□□□□□ -0.17
SGCA-202ENST00000344627 CCDC194A0A1B0GVG4 234 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 ZBTB42B2RXF5 422 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 MARCH6O60337 910 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 TDP2O95551 362 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 ITGB1P05556 798 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 CLCN3P51790 818 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 FAM189BP81408 668 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 NONOQ15233 471 aaKnown RBP eCLIP13.99□□□□□ -0.17
SGCA-202ENST00000344627 ANKRD1Q15327 319 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 EFCAB12Q6NXP0 572 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 BMP8AQ7Z5Y6 402 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 SMRP1Q8NCR6 262 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 SLC5A5Q92911 643 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 MSLNLQ96KJ4 702 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 SCLT1Q96NL6 688 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 RIT2Q99578 217 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 OSMRQ99650 979 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 ATP6V0A4Q9HBG4 840 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 ALG13Q9NP73 1137 aaKnown RBP13.99□□□□□ -0.17
SGCA-202ENST00000344627 TPCN1Q9ULQ1 816 aa13.99□□□□□ -0.17
SGCA-202ENST00000344627 NOC2LQ9Y3T9 749 aaKnown RBP13.99□□□□□ -0.17
SGCA-202ENST00000344627 EDIL3O43854 480 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 C22orf31O95567 290 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 OATP04181 439 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 ZSCAN20P17040 1043 aaPredicted RBP13.98□□□□□ -0.17
SGCA-202ENST00000344627 ATF7P17544 494 aaPredicted RBP13.98□□□□□ -0.17
SGCA-202ENST00000344627 LAG3P18627 525 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 SFNP31947 248 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 IRS1P35568 1242 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 PPM1AP35813 382 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms