RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 SUDS3Q9H7L9 328 aaPredicted RBP8.4□□□□□ -1.06
KPNA1-201ENST00000344337 SUPT3HO75486 399 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 EIF2AK2P19525 551 aaKnown RBP8.4□□□□□ -1.06
KPNA1-201ENST00000344337 PIK3CAP42336 1068 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 IKZF4Q9H2S9 585 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 THAP9Q9H5L6 903 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 DCP1AQ9NPI6 582 aaPredicted RBP8.4□□□□□ -1.06
KPNA1-201ENST00000344337 IQSEC2Q5JU85 1478 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 CAMSAP1Q5T5Y3 1602 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 I3L4J1 428 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 CLDN3O15551 220 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 SEZ6Q53EL9 994 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 ALS2CLQ60I27 953 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 CPA5Q8WXQ8 436 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 NUCKS1Q9H1E3 243 aaKnown RBP8.4□□□□□ -1.06
KPNA1-201ENST00000344337 TSKSQ9UJT2 592 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 CAPN11Q9UMQ6 739 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 FERP16591 822 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 ATP5DP30049 168 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 PDIA6Q15084 440 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 RNF169Q8NCN4 708 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 FAM84AQ96KN4 292 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 ACP6Q9NPH0 428 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 BABAM1Q9NWV8 329 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 PPARGC1AQ9UBK2 798 aaKnown RBP8.4□□□□□ -1.07
KPNA1-201ENST00000344337 CDK12Q9NYV4 1490 aaPredicted RBP8.4□□□□□ -1.07
KPNA1-201ENST00000344337 XDHP47989 1333 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 SMTNP53814 917 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 DNAJC3Q13217 504 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 CCDC137Q6PK04 289 aaKnown RBP8.4□□□□□ -1.07
KPNA1-201ENST00000344337 STAMBPL1Q96FJ0 436 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 ZNF577Q9BSK1 485 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 EHMT1Q9H9B1 1298 aa8.4□□□□□ -1.07
KPNA1-201ENST00000344337 TMEM2Q9UHN6 1383 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 SRGAP2CP0DJJ0 459 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 ICA1Q05084 483 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 RINT1Q6NUQ1 792 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 MAP3K14Q99558 947 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 BPIFA3Q9BQP9 254 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 KIFC3Q9BVG8 833 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 NT5C3AQ9H0P0 336 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 PASKQ96RG2 1323 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 AATKQ6ZMQ8 1374 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 ZFYVE16Q7Z3T8 1539 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 ECEL1O95672 775 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 TCN1P20061 433 aaPredicted RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 SNRNP27Q8WVK2 155 aaKnown RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 EPN3Q9H201 632 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 SEPT9Q9UHD8 586 aaPredicted RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 TARBP1Q13395 1621 aaKnown RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 PTK2Q05397 1052 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 KYNUQ16719 465 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 NSMCE1Q8WV22 266 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 PPWD1Q96BP3 646 aaKnown RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 FAM161BQ96MY7 647 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 TMEM237Q96Q45 408 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 MYO3BQ8WXR4 1341 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 HEG1Q9ULI3 1381 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 NDC80O14777 642 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 SLC16A4O15374 487 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 CYP26A1O43174 497 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 ESRRAP11474 423 aaPredicted RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 LIG4P49917 911 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 TFAMQ00059 246 aaKnown RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 STRN3Q13033 797 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 PFKFB3Q16875 520 aaPredicted RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 SMTNL2Q2TAL5 461 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 RNF207Q6ZRF8 634 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 ADGRA1Q86SQ6 560 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 ZBTB46Q86UZ6 589 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 RFX6Q8HWS3 928 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 NME8Q8N427 588 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 SLC35G2Q8TBE7 412 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 C18orf8Q96DM3 657 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 TRIM9Q9C026 710 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 VCXQ9H320 206 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 PFDN4Q9NQP4 134 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 ATG3Q9NT62 314 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 TUBE1Q9UJT0 475 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 SALL3Q9BXA9 1300 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 COL15A1P39059 1388 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 MYO9BQ13459 2157 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 URB1O60287 2271 aaKnown RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 HMGB1P1B2RPK0 211 aaPredicted RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 ZNF18P17022 549 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 ELF1P32519 619 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 NLRP11P59045 1033 aaKnown RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 MTERF2Q49AM1 385 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 EMBQ6PCB8 327 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 RGS9BPQ6ZS82 235 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 EPM2AIP1Q7L775 607 aaPredicted RBP8.39□□□□□ -1.07
KPNA1-201ENST00000344337 EXT2Q93063 718 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 MTMR8Q96EF0 704 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 C11orf70Q9BRQ4 267 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 ANKRD2Q9GZV1 360 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 PCDHA6Q9UN73 950 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 MINPP1Q9UNW1 487 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 PCDHA8Q9Y5H6 950 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 CDHR2Q9BYE9 1310 aa8.39□□□□□ -1.07
KPNA1-201ENST00000344337 TTC36A6NLP5 189 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms