RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 GLYCTKQ8IVS8 523 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 RAB17Q9H0T7 212 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 KCNMB3Q9NPA1 279 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 RIC8AQ9NPQ8 531 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 CTNNAL1Q9UBT7 734 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 BCS1LQ9Y276 419 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 SPDYE5A6NIY4 337 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 NR2F2P24468 414 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 GRM4Q14833 912 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 FAM47EQ6ZV65 393 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 JAMLQ86YT9 394 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 ETNK1Q9HBU6 452 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 TBK1Q9UHD2 729 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 FLOT1O75955 427 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 CCDC152Q4G0S7 254 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 CAVIN4Q5BKX8 364 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 SH3RF3Q8TEJ3 882 aaPredicted RBP16.1■□□□□ 0.17
CLCN1-201ENST00000343257 TMEM237Q96Q45 408 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 TMEM47Q9BQJ4 181 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 ZDHHC18Q9NUE0 388 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 IGSF9BQ9UPX0 1349 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 DDX3XO00571 662 aaKnown RBP eCLIP16.1■□□□□ 0.17
CLCN1-201ENST00000343257 IRF6O14896 467 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 FGRP09769 529 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 KCNJ1P48048 391 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 PDE6CP51160 858 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 KLRC3Q07444 240 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 EIF1ADQ8N9N8 165 aaKnown RBP16.1■□□□□ 0.17
CLCN1-201ENST00000343257 SLC35G2Q8TBE7 412 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 NAF1Q96HR8 494 aaKnown RBP16.1■□□□□ 0.17
CLCN1-201ENST00000343257 DDX23Q9BUQ8 820 aaKnown RBP16.1■□□□□ 0.17
CLCN1-201ENST00000343257 ZFATQ9P243 1243 aa16.1■□□□□ 0.17
CLCN1-201ENST00000343257 SUN1O94901 812 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 ZBTB48P10074 688 aaPredicted RBP16.09■□□□□ 0.17
CLCN1-201ENST00000343257 GNAT1P11488 350 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 ATP4AP20648 1035 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 SESN3P58005 492 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 ADCY2Q08462 1091 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 EXOC3L4Q17RC7 722 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 ZNF444Q8N0Y2 327 aaPredicted RBP16.09■□□□□ 0.17
CLCN1-201ENST00000343257 REXO1Q8N1G1 1221 aaKnown RBP16.09■□□□□ 0.17
CLCN1-201ENST00000343257 NSUN4Q96CB9 384 aaKnown RBP16.09■□□□□ 0.17
CLCN1-201ENST00000343257 BCAS3Q9H6U6 928 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 FRMPD2Q68DX3 1309 aaPredicted RBP16.09■□□□□ 0.17
CLCN1-201ENST00000343257 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 TMEM120BA0PK00 339 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 CLIC2O15247 247 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 SNUPNO95149 360 aaKnown RBP16.09■□□□□ 0.17
CLCN1-201ENST00000343257 RPL21P46778 160 aaKnown RBP16.09■□□□□ 0.17
CLCN1-201ENST00000343257 MXRA7P84157 204 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 BLMHQ13867 455 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 UBE2SQ16763 222 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 ZCWPW2Q504Y3 356 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 DUPD1Q68J44 220 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 ZDHHC24Q6UX98 284 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 EXOC3L1Q86VI1 746 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 POP1Q99575 1024 aaKnown RBP16.09■□□□□ 0.17
CLCN1-201ENST00000343257 IKZF4Q9H2S9 585 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 EMILIN3Q9NT22 766 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 KIAA1024Q9UPX6 916 aa16.09■□□□□ 0.17
CLCN1-201ENST00000343257 ANKRD63C9JTQ0 380 aa16.08■□□□□ 0.17
CLCN1-201ENST00000343257 CASP5P51878 434 aa16.08■□□□□ 0.17
CLCN1-201ENST00000343257 RAD23BP54727 409 aa16.08■□□□□ 0.17
CLCN1-201ENST00000343257 EVA1CP58658 441 aa16.08■□□□□ 0.17
CLCN1-201ENST00000343257 POU5F1Q01860 360 aaKnown RBP16.08■□□□□ 0.17
CLCN1-201ENST00000343257 RBBP5Q15291 538 aaKnown RBP16.08■□□□□ 0.17
CLCN1-201ENST00000343257 DNAJC19Q96DA6 116 aa16.08■□□□□ 0.17
CLCN1-201ENST00000343257 TXLNGYQ9BZA5 131 aa16.08■□□□□ 0.17
CLCN1-201ENST00000343257 SUCLA2Q9P2R7 463 aaPredicted RBP16.08■□□□□ 0.17
CLCN1-201ENST00000343257 CORO1CQ9ULV4 474 aaPredicted RBP16.08■□□□□ 0.17
CLCN1-201ENST00000343257 COL1A1P02452 1464 aaPredicted RBP16.08■□□□□ 0.17
CLCN1-201ENST00000343257 CETN3O15182 167 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 CYP19A1P11511 503 aaPredicted RBP16.08■□□□□ 0.16
CLCN1-201ENST00000343257 AUHQ13825 339 aaKnown RBP16.08■□□□□ 0.16
CLCN1-201ENST00000343257 ZNF526Q8TF50 670 aaPredicted RBP16.08■□□□□ 0.16
CLCN1-201ENST00000343257 SCFD1Q8WVM8 642 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.08■□□□□ 0.16
CLCN1-201ENST00000343257 ETAA1Q9NY74 926 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 STK17AQ9UEE5 414 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 SEC63Q9UGP8 760 aaKnown RBP16.08■□□□□ 0.16
CLCN1-201ENST00000343257 STXBP5LQ9Y2K9 1186 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 ABCB11O95342 1321 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 HIP1RO75146 1068 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 PON1P27169 355 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 C6orf118Q5T5N4 469 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 LONP2Q86WA8 852 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 GPBP1Q86WP2 473 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 RASGEF1CQ8N431 466 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 CEP120Q8N960 986 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 ARHGEF2Q92974 986 aaKnown RBP16.08■□□□□ 0.16
CLCN1-201ENST00000343257 ARHGEF26Q96DR7 871 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 PGM2Q96G03 612 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 TSC22D3Q99576 134 aa16.08■□□□□ 0.16
CLCN1-201ENST00000343257 BMP2KQ9NSY1 1161 aaPredicted RBP16.08■□□□□ 0.16
CLCN1-201ENST00000343257 GOLGA6L10A0A0M3HER8 536 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 CES2O00748 559 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 KIAA0391O15091 583 aaKnown RBP16.07■□□□□ 0.16
CLCN1-201ENST00000343257 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 GNAQP50148 359 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms