RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 TUBP50607 506 aa16.52■□□□□ 0.24
SNX18-202ENST00000343017 DAGLBQ8NCG7 672 aa16.52■□□□□ 0.24
SNX18-202ENST00000343017 DNAJC19Q96DA6 116 aa16.52■□□□□ 0.24
SNX18-202ENST00000343017 PGM2Q96G03 612 aa16.52■□□□□ 0.24
SNX18-202ENST00000343017 TMOD4Q9NZQ9 345 aa16.52■□□□□ 0.24
SNX18-202ENST00000343017 USP15Q9Y4E8 981 aaPredicted RBP16.52■□□□□ 0.24
SNX18-202ENST00000343017 DPPA5A6NC42 116 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 CCDC169A6NNP5 214 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 PDHA1P08559 390 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 H2AFZP0C0S5 128 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 KRT13P13646 458 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 PRDX5P30044 214 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 ITPK1Q13572 414 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 LLGL1Q15334 1064 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 H2AFVQ71UI9 128 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 CCDC25Q86WR0 208 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 C18orf8Q96DM3 657 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 RMDN2Q96LZ7 410 aa16.52■□□□□ 0.23
SNX18-202ENST00000343017 IRF6O14896 467 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 ATP2A2P16615 1042 aaKnown RBP16.51■□□□□ 0.23
SNX18-202ENST00000343017 GALNTL6Q49A17 601 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 UBA5Q9GZZ9 404 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 ZCWPW1Q9H0M4 648 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 PIDD1Q9HB75 910 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 BCL9O00512 1426 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 DDX3XO00571 662 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■■■■ 31.8
SNX18-202ENST00000343017 GALCP54803 685 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 BNIP1Q12981 228 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 KSR1Q8IVT5 923 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 ZNF34Q8IZ26 560 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 CNKSR1Q969H4 720 aa16.51■□□□□ 0.23
SNX18-202ENST00000343017 NSUN4Q96CB9 384 aaKnown RBP16.51■□□□□ 0.23
SNX18-202ENST00000343017 SUCLA2Q9P2R7 463 aaPredicted RBP16.51■□□□□ 0.23
SNX18-202ENST00000343017 E9PMD0 336 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 GH1P01241 217 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 NUDT17P0C025 328 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 IFI16Q16666 785 aaKnown RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 LONRF1Q17RB8 773 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 EXOC3L1Q86VI1 746 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 JAMLQ86YT9 394 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 HES6Q96HZ4 224 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 CRAMP1Q96RY5 1269 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 PLCD4Q9BRC7 762 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 AMFRQ9UKV5 643 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 IGSF9BQ9UPX0 1349 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 PLCH1Q4KWH8 1693 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 KLHL33A6NCF5 533 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 SPDYE5A6NIY4 337 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 EDIL3O43854 480 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 AUHQ13825 339 aaKnown RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 DCAF17Q5H9S7 520 aaPredicted RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 DPY19L2P1Q6NXN4 242 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 BARGINQ6ZT62 677 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 SLFN11Q7Z7L1 901 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 MTMR9Q96QG7 549 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 CRNKL1Q9BZJ0 848 aaKnown RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 MKNK2Q9HBH9 465 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 NIP7Q9Y221 180 aaKnown RBP eCLIP16.5■□□□□ 0.23
SNX18-202ENST00000343017 A6NHS1 94 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 BTNL10A8MVZ5 291 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 KIAA0391O15091 583 aaKnown RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 GFPT2O94808 682 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 PLCG2P16885 1265 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 ATP4AP20648 1035 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 RPL21P46778 160 aaKnown RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 PDE6CP51160 858 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 KIAA1755Q5JYT7 1200 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 TCERG1LQ5VWI1 586 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 SEPT14Q6ZU15 432 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 PROM2Q8N271 834 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 NAF1Q96HR8 494 aaKnown RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 PIGSQ96S52 555 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 TMEM47Q9BQJ4 181 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 RAB17Q9H0T7 212 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 KCNK9Q9NPC2 374 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 ARHGEF3Q9NR81 526 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 ZFATQ9P243 1243 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 STK17AQ9UEE5 414 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 CHORDC1Q9UHD1 332 aaPredicted RBP16.5■□□□□ 0.23
SNX18-202ENST00000343017 HDAC9Q9UKV0 1011 aa16.5■□□□□ 0.23
SNX18-202ENST00000343017 MYH3P11055 1940 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 PCP11498 1178 aaKnown RBP16.49■□□□□ 0.23
SNX18-202ENST00000343017 PTENP60484 403 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 KRT79Q5XKE5 535 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 SLC35G2Q8TBE7 412 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 SCFD1Q8WVM8 642 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 TFCP2L1Q9NZI6 479 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 RASGRF2O14827 1237 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 PON1P27169 355 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 ICA1Q05084 483 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 ALG3Q92685 438 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms