RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 MYL7Q01449 175 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 DAB2IPQ5VWQ8 1189 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 MIER3Q7Z3K6 550 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 TADA2BQ86TJ2 420 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 PASD1Q8IV76 773 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 KAT5Q92993 513 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 TCHPQ9BT92 498 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 COL4A1P02462 1669 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 POLR2MP0CAP2 368 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 STAT2P52630 851 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 NPEPPSP55786 919 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 HDLBPQ00341 1268 aaKnown RBP13.62□□□□□ -0.23
LMX1A-202ENST00000342310 EMBQ6PCB8 327 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 SLC35G2Q8TBE7 412 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 LMBR1Q8WVP7 490 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 AJAP1Q9UKB5 411 aaPredicted RBP13.62□□□□□ -0.23
LMX1A-202ENST00000342310 NR2E1Q9Y466 385 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 CNTNAP4Q9C0A0 1308 aa13.62□□□□□ -0.23
LMX1A-202ENST00000342310 ECE2O60344 883 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 GNA14O95837 355 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 FGFR4P22455 802 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 PSMC2P35998 433 aaKnown RBP13.61□□□□□ -0.23
LMX1A-202ENST00000342310 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 PSMD2Q13200 908 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 XKR9Q5GH70 373 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 KAZNQ674X7 775 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 HGSNATQ68CP4 663 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 PALB2Q86YC2 1186 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 SLC20A1Q8WUM9 679 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 TBC1D31Q96DN5 1066 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 THAP2Q9H0W7 228 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 CCPG1Q9ULG6 757 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 H0YIN7 160 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 ARP10275 920 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 NAB2Q15742 525 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 APOBEC3HQ6NTF7 200 aaKnown RBP13.61□□□□□ -0.23
LMX1A-202ENST00000342310 PI4K2AQ9BTU6 479 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 PRR12Q9ULL5 1215 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 SIPA1L3O60292 1781 aaPredicted RBP13.61□□□□□ -0.23
LMX1A-202ENST00000342310 TJP1Q07157 1748 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 CTNND1O60716 968 aaKnown RBP13.61□□□□□ -0.23
LMX1A-202ENST00000342310 GCFC2P16383 781 aaKnown RBP13.61□□□□□ -0.23
LMX1A-202ENST00000342310 ZNF394Q53GI3 561 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 AGBL1Q96MI9 1066 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 LXNQ9BS40 222 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 GLIS2Q9BZE0 524 aaPredicted RBP13.61□□□□□ -0.23
LMX1A-202ENST00000342310 KLHL11Q9NVR0 708 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 PDE4DIPQ5VU43 2346 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 ALS2Q96Q42 1657 aa13.61□□□□□ -0.23
LMX1A-202ENST00000342310 FOXO6A8MYZ6 492 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 TULP2O00295 520 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 FTLP02792 175 aaPredicted RBP13.6□□□□□ -0.23
LMX1A-202ENST00000342310 NEFHP12036 1026 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 DLGAP5Q15398 846 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 MUM1L1Q5H9M0 696 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 PLA2G4FQ68DD2 849 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 GSTA5Q7RTV2 222 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 TMEM39BQ9GZU3 492 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 AFF2P51816 1311 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 EMSYQ7Z589 1322 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 NUP98P52948 1817 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 TARSL2A2RTX5 802 aaKnown RBP13.6□□□□□ -0.23
LMX1A-202ENST00000342310 ZNF233A6NK53 670 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 FOXN3O00409 490 aaPredicted RBP13.6□□□□□ -0.23
LMX1A-202ENST00000342310 USP38Q8NB14 1042 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 RBM46Q8TBY0 533 aaKnown RBP13.6□□□□□ -0.23
LMX1A-202ENST00000342310 C1orf54Q8WWF1 131 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 P2RX7Q99572 595 aaKnown RBP13.6□□□□□ -0.23
LMX1A-202ENST00000342310 DCDC2CA8MYV0 355 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 SF3B2Q13435 895 aaKnown RBP13.6□□□□□ -0.23
LMX1A-202ENST00000342310 TNIP1Q15025 636 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 FAM133BQ5BKY9 247 aaKnown RBP13.6□□□□□ -0.23
LMX1A-202ENST00000342310 EEPD1Q7L9B9 569 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 CPNE8Q86YQ8 564 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 HAUS1Q96CS2 278 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 GJD4Q96KN9 370 aaPredicted RBP13.6□□□□□ -0.23
LMX1A-202ENST00000342310 NUCKS1Q9H1E3 243 aaKnown RBP13.6□□□□□ -0.23
LMX1A-202ENST00000342310 RAVER2Q9HCJ3 691 aaKnown RBP13.6□□□□□ -0.23
LMX1A-202ENST00000342310 PPP1R9AQ9ULJ8 1098 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 DAAM1Q9Y4D1 1078 aa13.6□□□□□ -0.23
LMX1A-202ENST00000342310 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 LSP1P33241 339 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 DLG4P78352 724 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 CBWD6Q4V339 395 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 CBWD3Q5JTY5 395 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 CBWD5Q5RIA9 395 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 RINT1Q6NUQ1 792 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 PROM2Q8N271 834 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 MMGT1Q8N4V1 131 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 ZSWIM2Q8NEG5 633 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 GDAP1Q8TB36 358 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 AENQ8WTP8 325 aaKnown RBP13.59□□□□□ -0.23
LMX1A-202ENST00000342310 LRRC45Q96CN5 670 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 ARHGEF10LQ9HCE6 1279 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 ZNF277Q9NRM2 450 aaPredicted RBP13.59□□□□□ -0.23
LMX1A-202ENST00000342310 SWAP70Q9UH65 585 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 PNMA2Q9UL42 364 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms