RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 ITIH6Q6UXX5 1313 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 PIK3CDO00329 1044 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 HIP1RO75146 1068 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 NAP1L1P55209 391 aaKnown RBP14.31□□□□□ -0.12
COL18A1-201ENST00000342220 SPIRE1Q08AE8 756 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 STXBP2Q15833 593 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 PNMA8AQ86V59 439 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-201ENST00000342220 ANKZF1Q9H8Y5 726 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 AGO4Q9HCK5 861 aaKnown RBP14.31□□□□□ -0.12
COL18A1-201ENST00000342220 ABHD10Q9NUJ1 306 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 PDHXO00330 501 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 YWHABP31946 246 aaKnown RBP14.31□□□□□ -0.12
COL18A1-201ENST00000342220 MAGEA9P43362 315 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 QARSP47897 775 aaKnown RBP14.31□□□□□ -0.12
COL18A1-201ENST00000342220 GIT2Q14161 759 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 TMEM119Q4V9L6 283 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 CCDC127Q96BQ5 260 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 DNAJC19Q96DA6 116 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 DUSP9Q99956 384 aaKnown RBP14.31□□□□□ -0.12
COL18A1-201ENST00000342220 CTAGE9A4FU28 777 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 CCNE2O96020 404 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 OSBPP22059 807 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 USP8P40818 1118 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 LEKR1Q6ZMV7 388 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 METTL13Q8N6R0 699 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 TMEM143Q96AN5 459 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 CCDC51Q96ER9 411 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 JADE2Q9NQC1 790 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 MAP2K2P36507 400 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 HSD17B4P51659 736 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 SETQ01105 290 aaPredicted RBP14.3□□□□□ -0.12
COL18A1-201ENST00000342220 SPAG1Q07617 926 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 SNAPC2Q13487 334 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 TTI2Q6NXR4 508 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 TMTC1Q8IUR5 882 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 PNKPQ96T60 521 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 MMP19Q99542 508 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 PARVGQ9HBI0 331 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 SEPT11Q9NVA2 429 aaKnown RBP14.3□□□□□ -0.12
COL18A1-201ENST00000342220 COL4A3BPQ9Y5P4 624 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 PPP2R3BQ9Y5P8 575 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 BRCA1P38398 1863 aaKnown RBP14.3□□□□□ -0.12
COL18A1-201ENST00000342220 CYP3A7-CYP3A51PA0A087WV96 503 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 LRRC10BA6NIK2 292 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 GGPS1O95749 300 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 FECHP22830 423 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 CYP3A7P24462 503 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 GJA5P36382 358 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 CASP4P49662 377 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 RAPGEF1Q13905 1077 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 PTPROQ16827 1216 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 MCTP2Q6DN12 878 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 CEP112Q8N8E3 955 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 SCLT1Q96NL6 688 aa14.3□□□□□ -0.12
COL18A1-201ENST00000342220 JPH1Q9HDC5 661 aaPredicted RBP14.3□□□□□ -0.12
COL18A1-201ENST00000342220 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL18A1-201ENST00000342220 CCDC151A5D8V7 595 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 CETN3O15182 167 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 EXOC3O60645 756 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 CSDE1O75534 798 aaKnown RBP14.29□□□□□ -0.12
COL18A1-201ENST00000342220 CIITAP33076 1130 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 SLC12A3P55017 1021 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 KCNB1Q14721 858 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 SCFD1Q8WVM8 642 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 DHTKD1Q96HY7 919 aaPredicted RBP14.29□□□□□ -0.12
COL18A1-201ENST00000342220 CHP1Q99653 195 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 TCHPQ9BT92 498 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL18A1-201ENST00000342220 AGPAT5Q9NUQ2 364 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 LUC7L2Q9Y383 392 aaKnown RBP14.29□□□□□ -0.12
COL18A1-201ENST00000342220 LRRIQ4A6NIV6 560 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 EYA4O95677 639 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 P4HBP07237 508 aaKnown RBP14.29□□□□□ -0.12
COL18A1-201ENST00000342220 RHOXF2BP0C7M4 288 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 ARHGAP25P42331 645 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 PPATQ06203 517 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 EPHA7Q15375 998 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 HS2ST1Q7LGA3 356 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 CDR2LQ86X02 465 aaPredicted RBP14.29□□□□□ -0.12
COL18A1-201ENST00000342220 SLC5A5Q92911 643 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 RHOXF2Q9BQY4 288 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 PDGFCQ9NRA1 345 aa14.29□□□□□ -0.12
COL18A1-201ENST00000342220 WDR64B1ANS9 1081 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 EIF3CLB5ME19 914 aaKnown RBP14.28□□□□□ -0.12
COL18A1-201ENST00000342220 BRD3Q15059 726 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 PCNX4Q63HM2 1172 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 CYP26C1Q6V0L0 522 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 IRF2BP1Q8IU81 584 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 SYT2Q8N9I0 419 aaPredicted RBP14.28□□□□□ -0.12
COL18A1-201ENST00000342220 EIF3CQ99613 913 aaKnown RBP14.28□□□□□ -0.12
COL18A1-201ENST00000342220 TRIM10Q9UDY6 481 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 H3BQF6 201 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 TBX3O15119 743 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 TRIM49P0CI25 452 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 TRIM49CP0CI26 452 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 RRAGAQ7L523 313 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 VSIG10LQ86VR7 867 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 NAPGQ99747 312 aaPredicted RBP14.28□□□□□ -0.12
COL18A1-201ENST00000342220 HSD17B14Q9BPX1 270 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms