RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ERGIC2Q96RQ1 377 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 MAP7D2Q96T17 732 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 HAUS4Q9H6D7 363 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 CD2APQ9Y5K6 639 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 FZD9O00144 591 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 ZNF263O14978 683 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 CYP3A4P08684 503 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 CCND2P30279 289 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 KCNJ6P48051 423 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 C2orf54Q08AI8 447 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 NFRKBQ6P4R8 1299 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 STXBP4Q6ZWJ1 553 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 MTMR14Q8NCE2 650 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 PROCA1Q8NCQ7 364 aaPredicted RBP11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 TMEM143Q96AN5 459 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 ANKFY1Q9P2R3 1169 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 FOCADQ5VW36 1801 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 LRRIQ4A6NIV6 560 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 TACC1O75410 805 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 TADA3O75528 432 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 CCNE2O96020 404 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 SSTR3P32745 418 aaPredicted RBP11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 SEZ6Q53EL9 994 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 ZNF746Q6NUN9 644 aaPredicted RBP11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 C1orf186Q6ZWK4 172 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 NOA1Q8NC60 698 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 POP1Q99575 1024 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 TEX13BQ9BXU2 312 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 GTPBP4Q9BZE4 634 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 TUFT1Q9NNX1 390 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 CDC23Q9UJX2 597 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 IRF6O14896 467 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 PHACTR2O75167 634 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 PRPF4BQ13523 1007 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 GBP6Q6ZN66 633 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 MBOAT7Q96N66 472 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 CCDC94Q9BW85 323 aaPredicted RBP11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 R3HDMLQ9H3Y0 253 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 PCDHA2Q9Y5H9 948 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 IGBP1P78318 339 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 SKIDA1Q1XH10 827 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 TRIM59Q8IWR1 403 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 KLRG1Q96E93 195 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 ZBED3Q96IU2 234 aaPredicted RBP11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 ACAD9Q9H845 621 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 L2HGDHQ9H9P8 463 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 WDR64B1ANS9 1081 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 HNRNPDLO14979 420 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 PSMC2P35998 433 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 DLG4P78352 724 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 MAP2K1Q02750 393 aaPredicted RBP11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 PPP2R5CQ13362 524 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 ZCWPW2Q504Y3 356 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 HYIQ5T013 277 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 ADAT2Q7Z6V5 191 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 NSUN6Q8TEA1 469 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 ANKRD7Q92527 254 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 GLG1Q92896 1179 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 TCHPQ9BT92 498 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 PARD6BQ9BYG5 372 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 GINS2Q9Y248 185 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 SAR1BQ9Y6B6 198 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 PITPNM2Q9BZ72 1349 aa11.12□□□□□ -0.63
RBFOX1-202ENST00000340209 GNA14O95837 355 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 CALCAP01258 141 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 RARRES1P49788 294 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 EHHADHQ08426 723 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 HAUS6Q7Z4H7 955 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 PPM1KQ8N3J5 372 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 CEP63Q96MT8 703 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 ALS2CR12Q96Q35 445 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 ACP6Q9NPH0 428 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 AGPAT3Q9NRZ7 376 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 A0A087X0T9 212 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 DENND3A2RUS2 1198 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 TGFB1I1O43294 461 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 FAM228BP0C875 321 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 GAP43P17677 238 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 MMP14P50281 582 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 VAV2P52735 878 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 MYL7Q01449 175 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 MTERF4Q7Z6M4 381 aaKnown RBP11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 RETREG2Q8NC44 543 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 POMGNT1Q8WZA1 660 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 ZBTB10Q96DT7 871 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 KMT5AQ9NQR1 393 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 TOPORSQ9NS56 1045 aaPredicted RBP11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 AJAP1Q9UKB5 411 aaPredicted RBP11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 UCHL3P15374 230 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 NF2P35240 595 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 HSD17B4P51659 736 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 POLGP54098 1239 aaPredicted RBP11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 CDR2LQ86X02 465 aaPredicted RBP11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 MMS19Q96T76 1030 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 TTYH3Q9C0H2 523 aa11.11□□□□□ -0.63
RBFOX1-202ENST00000340209 PGAP2Q9UHJ9 254 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms