RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 ALDH8A1Q9H2A2 487 aaPredicted RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 NPHP4O75161 1426 aaPredicted RBP13.4□□□□□ -0.27
OTOF-203ENST00000339598 IQANK1A0A1B0GTG1 560 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 RASA4BC9J798 803 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 RASA4O43374 803 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 SLC4A1P02730 911 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 NCF2P19878 526 aaPredicted RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 SPARCL1Q14515 664 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 ZNF746Q6NUN9 644 aaPredicted RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 SIX6OS1Q8N1H7 587 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 MCPH1Q8NEM0 835 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 TTC17Q96AE7 1141 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 NUDCD1Q96RS6 583 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 C11orf70Q9BRQ4 267 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 TDRD3Q9H7E2 651 aaKnown RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 BARHL2Q9NY43 387 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 ANGPTL3Q9Y5C1 460 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 CFLARO15519 480 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 THOC5Q13769 683 aaKnown RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 TADA2BQ86TJ2 420 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 EFHD1Q9BUP0 239 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 TRIM4Q9C037 500 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 RFX7Q2KHR2 1363 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 UTYO14607 1347 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 A0A0G2JND7 137 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 GOLGA8CPA6NN73 597 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 CLDN3O15551 220 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 LPXNO60711 386 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 TDP2O95551 362 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 NPR1P16066 1061 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 GUCY1A2P33402 732 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 MTMR1Q13613 665 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 GPR162Q16538 588 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 METTL16Q86W50 562 aaKnown RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 INTUQ9ULD6 942 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 DIS3Q9Y2L1 958 aaKnown RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 WDR64B1ANS9 1081 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 MAGEA9P43362 315 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 ATP2C1P98194 919 aaPredicted RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 HDLBPQ00341 1268 aaKnown RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 IL1RL1Q01638 556 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 EXOSC10Q01780 885 aaKnown RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 DRAP1Q14919 205 aaPredicted RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 PASD1Q8IV76 773 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 DCAF4Q8WV16 495 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 PRPF31Q8WWY3 499 aaKnown RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 MLXIPLQ9NP71 852 aa13.39□□□□□ -0.27
OTOF-203ENST00000339598 TTC7AQ9ULT0 858 aaPredicted RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 PACSIN2Q9UNF0 486 aaPredicted RBP13.39□□□□□ -0.27
OTOF-203ENST00000339598 LDHAP00338 332 aaKnown RBP13.38□□□□□ -0.27
OTOF-203ENST00000339598 GRM4Q14833 912 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 IQCB1Q15051 598 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 BANK1Q8NDB2 785 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 ZNF526Q8TF50 670 aaPredicted RBP13.38□□□□□ -0.27
OTOF-203ENST00000339598 AP5M1Q9H0R1 490 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 CPSF3Q9UKF6 684 aaKnown RBP13.38□□□□□ -0.27
OTOF-203ENST00000339598 CDHR2Q9BYE9 1310 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 TRPA1O75762 1119 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 SLC12A1Q13621 1099 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 RPAINQ86UA6 219 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 RSPH3Q86UC2 560 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 RNF25Q96BH1 459 aaPredicted RBP13.38□□□□□ -0.27
OTOF-203ENST00000339598 F5H6K3 240 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 SLC16A4O15374 487 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 FCER1AP12319 257 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 CRKP46108 304 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 TMPRSS15P98073 1019 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 KLRC3Q07444 240 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 QRICH1Q2TAL8 776 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 TMED8Q6PL24 325 aaPredicted RBP13.38□□□□□ -0.27
OTOF-203ENST00000339598 TMEM270Q6UE05 265 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 ARMCX2Q7L311 632 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 METTL23Q86XA0 190 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 HSPH1Q92598 858 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 HAUS8Q9BT25 410 aa13.38□□□□□ -0.27
OTOF-203ENST00000339598 A0A1W2PQC6 194 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 FTLP02792 175 aaPredicted RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 PRELPP51888 382 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 ARL4CP56559 192 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 TFDP2Q14188 446 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 GLYCTKQ8IVS8 523 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 DYDC2Q96IM9 177 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 RBM41Q96IZ5 413 aaKnown RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 PPARGC1AQ9UBK2 798 aaKnown RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 NARFQ9UHQ1 456 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 SCOCQ9UIL1 159 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 NCAPD2Q15021 1401 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 NBPF26B4DH59 902 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 KPNA2P52292 529 aaKnown RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 TRIM28Q13263 835 aaKnown RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 ART3Q13508 389 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 NBPF10Q6P3W6 841 aaKnown RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 NBPF15Q8N660 670 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 HIPK4Q8NE63 616 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 SPATA4Q8NEY3 305 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 OR6B3Q8NGW1 331 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 TRIM55Q9BYV6 548 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 SAMD9LQ8IVG5 1584 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 AP1ARQ63HQ0 302 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms