RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 A0A087WWV3 80 aa17.12■□□□□ 0.33
SEC13-201ENST00000337354 PLCG1P19174 1290 aa17.12■□□□□ 0.33
SEC13-201ENST00000337354 METTL13Q8N6R0 699 aa17.12■□□□□ 0.33
SEC13-201ENST00000337354 TCP11Q8WWU5 503 aa17.12■□□□□ 0.33
SEC13-201ENST00000337354 PLIN2Q99541 437 aa17.12■□□□□ 0.33
SEC13-201ENST00000337354 SH2D3AQ9BRG2 576 aa17.12■□□□□ 0.33
SEC13-201ENST00000337354 HIPK3Q9H422 1215 aa17.12■□□□□ 0.33
SEC13-201ENST00000337354 SUGCTQ9HAC7 445 aa17.12■□□□□ 0.33
SEC13-201ENST00000337354 PRDM5Q9NQX1 630 aaPredicted RBP17.12■□□□□ 0.33
SEC13-201ENST00000337354 KCND2Q9NZV8 630 aa17.12■□□□□ 0.33
SEC13-201ENST00000337354 PARNO95453 639 aaKnown RBP17.11■□□□□ 0.33
SEC13-201ENST00000337354 TIMP1P01033 207 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 CYP11B2P19099 503 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 TRIM71Q2Q1W2 868 aaKnown RBP17.11■□□□□ 0.33
SEC13-201ENST00000337354 IER5Q5VY09 327 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 PADI6Q6TGC4 694 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 KCNK18Q7Z418 384 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 LINC01465Q8N7H1 131 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 IQUBQ8NA54 791 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 MCPH1Q8NEM0 835 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 DNAJB3Q8WWF6 145 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 NOC4LQ9BVI4 516 aaKnown RBP17.11■□□□□ 0.33
SEC13-201ENST00000337354 CUEDC2Q9H467 287 aa17.11■□□□□ 0.33
SEC13-201ENST00000337354 FAM237AA0A1B0GTK4 181 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 TRIM43BA6NCK2 446 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 ASAP2O43150 1006 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 PLA2G4BP0C869 781 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 CKBP12277 381 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 RAG1P15918 1043 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 THPOP40225 353 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 SLC12A3P55017 1021 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 RUFY4Q6ZNE9 571 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 TMEM87AQ8NBN3 555 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 LARP4BQ92615 738 aaKnown RBP17.1■□□□□ 0.33
SEC13-201ENST00000337354 DHX38Q92620 1227 aaKnown RBP17.1■□□□□ 0.33
SEC13-201ENST00000337354 RAD54LQ92698 747 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 TRIM43Q96BQ3 446 aaPredicted RBP17.1■□□□□ 0.33
SEC13-201ENST00000337354 GBP4Q96PP9 640 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 MAP7D2Q96T17 732 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 MTRQ99707 1265 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 TIPINQ9BVW5 301 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 ATP6V0A4Q9HBG4 840 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 PCDH10Q9P2E7 1040 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 KCNH3Q9ULD8 1083 aa17.1■□□□□ 0.33
SEC13-201ENST00000337354 SELPP16109 830 aa17.09■□□□□ 0.33
SEC13-201ENST00000337354 STAT6P42226 847 aa17.09■□□□□ 0.33
SEC13-201ENST00000337354 EMC2Q15006 297 aa17.09■□□□□ 0.33
SEC13-201ENST00000337354 FAM26DQ5JW98 314 aa17.09■□□□□ 0.33
SEC13-201ENST00000337354 ZBTB10Q96DT7 871 aa17.09■□□□□ 0.33
SEC13-201ENST00000337354 PANK2Q9BZ23 570 aa17.09■□□□□ 0.33
SEC13-201ENST00000337354 FAM49AQ9H0Q0 323 aaPredicted RBP17.09■□□□□ 0.33
SEC13-201ENST00000337354 BLOC1S4Q9NUP1 217 aa17.09■□□□□ 0.33
SEC13-201ENST00000337354 USP25Q9UHP3 1055 aa17.09■□□□□ 0.33
SEC13-201ENST00000337354 DNAH12Q6ZR08 3092 aa17.08■□□□□ 0.33
SEC13-201ENST00000337354 RSPH10B2B2RC85 870 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 M0QZ92 97 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 POLR2DO15514 142 aaKnown RBP17.08■□□□□ 0.32
SEC13-201ENST00000337354 IQCF3P0C7M6 154 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 RSPH10BP0C881 870 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 MXD4Q14582 209 aaPredicted RBP17.08■□□□□ 0.32
SEC13-201ENST00000337354 NAALADL2Q58DX5 795 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 MFSD5Q6N075 450 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 SV2BQ7L1I2 683 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 LRRC71Q8N4P6 559 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 TMEM199Q8N511 208 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 PDILTQ8N807 584 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 PSPC1Q8WXF1 523 aaKnown RBP17.08■□□□□ 0.32
SEC13-201ENST00000337354 MRPS27Q92552 414 aaKnown RBP17.08■□□□□ 0.32
SEC13-201ENST00000337354 WNT8BQ93098 351 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 LRRC27Q9C0I9 530 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 SUCLA2Q9P2R7 463 aaPredicted RBP17.08■□□□□ 0.32
SEC13-201ENST00000337354 KCNG1Q9UIX4 513 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 HPSEQ9Y251 543 aa17.08■□□□□ 0.32
SEC13-201ENST00000337354 USO1O60763 962 aaKnown RBP17.07■□□□□ 0.32
SEC13-201ENST00000337354 SSBP05455 408 aaKnown RBP eCLIP17.07■□□□□ 0.32
SEC13-201ENST00000337354 PFKFB1P16118 471 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 GUCY2CP25092 1073 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 RFC2P35250 354 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 CLCN3P51790 818 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 MRPS6P82932 125 aaKnown RBP17.07■□□□□ 0.32
SEC13-201ENST00000337354 AMPD3Q01432 767 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
SEC13-201ENST00000337354 E2F4Q16254 413 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 ZNF618Q5T7W0 954 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 FAM43BQ6ZT52 329 aaPredicted RBP17.07■□□□□ 0.32
SEC13-201ENST00000337354 LRRC8DQ7L1W4 858 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 PPP1R12CQ9BZL4 782 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 MAGEF1Q9HAY2 307 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 XPNPEP1Q9NQW7 623 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 BMP2KQ9NSY1 1161 aaPredicted RBP17.07■□□□□ 0.32
SEC13-201ENST00000337354 AKT3Q9Y243 479 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 SQORQ9Y6N5 450 aa17.07■□□□□ 0.32
SEC13-201ENST00000337354 A0A087X0B3 334 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 A0A1B0GVL5 298 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 CYP2C18P33260 490 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms