RNA–Protein interactions for RNA: ENST00000337109.8

MRPL35-202, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MRPL35, Length 3,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-202ENST00000337109 NBPF20Q3BBV1 942 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 CBWD6Q4V339 395 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 PRR16Q569H4 304 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 TNFAIP8L3Q5GJ75 292 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 CBWD3Q5JTY5 395 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 CBWD5Q5RIA9 395 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 SFMBT2Q5VUG0 894 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 IQCEQ6IPM2 695 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 NFRKBQ6P4R8 1299 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 CCDC42Q96M95 316 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 CSRNP1Q96S65 589 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 TSG101Q99816 390 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 LRRC1Q9BTT6 524 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 TIPINQ9BVW5 301 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 PDGFDQ9GZP0 370 aaPredicted RBP5.78□□□□□ -1.48
MRPL35-202ENST00000337109 IKZF4Q9H2S9 585 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 JADE2Q9NQC1 790 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 AGPAT3Q9NRZ7 376 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 RGL1Q9NZL6 768 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 DNM3Q9UQ16 869 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 STYXL1Q9Y6J8 313 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 POLR2AP24928 1970 aaKnown RBP5.78□□□□□ -1.48
MRPL35-202ENST00000337109 NR2F2P24468 414 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 INPP5BP32019 993 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 SNAP25P60880 206 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 TCP10Q12799 353 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 KIF5AQ12840 1032 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 SPDYCQ5MJ68 293 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 NT5DC3Q86UY8 548 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 TPCN2Q8NHX9 752 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 IL31RAQ8NI17 732 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 DDX1Q92499 740 aaKnown RBP5.78□□□□□ -1.48
MRPL35-202ENST00000337109 PDE11AQ9HCR9 933 aa5.78□□□□□ -1.48
MRPL35-202ENST00000337109 SUCLA2Q9P2R7 463 aaPredicted RBP5.78□□□□□ -1.48
MRPL35-202ENST00000337109 NOCTQ9UK39 431 aaKnown RBP5.78□□□□□ -1.48
MRPL35-202ENST00000337109 IGKV6D-21A0A0A0MT36 114 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 ATG7O95352 703 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 ACTN1P12814 892 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 ALAS1P13196 640 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 RTP1P59025 263 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 RASA3Q14644 834 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 CCDC142Q17RM4 750 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 CCDC96Q2M329 555 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 SLC9C1Q4G0N8 1177 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 C4orf19Q8IY42 314 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 USP38Q8NB14 1042 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 NEK11Q8NG66 645 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 LPAR1Q92633 364 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 DYDC2Q96IM9 177 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 LSM14BQ9BX40 385 aaKnown RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 STK33Q9BYT3 514 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 BHMT2Q9H2M3 363 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 EPB41L4BQ9H329 900 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 GOPCQ9HD26 462 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 RBM12Q9NTZ6 932 aaKnown RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 SHTN1A0MZ66 631 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 SRRM3A6NNA2 597 aaPredicted RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 WDR46O15213 610 aaKnown RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 CALUO43852 315 aaPredicted RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 ZEB2O60315 1214 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 GLI1P08151 1106 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 MCM3P25205 808 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 ADSSP30520 456 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 HOXA13P31271 388 aaPredicted RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 FMO5P49326 533 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 RARRES1P49788 294 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 COG2Q14746 738 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 HERC4Q5GLZ8 1057 aaPredicted RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 PHLDB3Q6NSJ2 640 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 SLC39A4Q6P5W5 647 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 LDHDQ86WU2 507 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 TSEN2Q8NCE0 465 aaKnown RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 BANK1Q8NDB2 785 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 ERMNQ8TAM6 284 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 SELENOOQ9BVL4 669 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 WDR11Q9BZH6 1224 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 IGSF9BQ9UPX0 1349 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 FZD9O00144 591 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 TRAF5O00463 557 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 CETN3O15182 167 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 NPHP1O15259 732 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 HSPA9P38646 679 aaKnown RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 ATP2B2Q01814 1243 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 PABPC4Q13310 644 aaKnown RBP eCLIP5.77□□□□□ -1.497e-6■□□□□ 8.5
MRPL35-202ENST00000337109 SIX1Q15475 284 aaPredicted RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 NOL9Q5SY16 702 aaKnown RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 EMBQ6PCB8 327 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 RDM1Q8NG50 284 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 ATP8B4Q8TF62 1192 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 GBP3Q9H0R5 595 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 ZNRF3Q9ULT6 936 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 CNTN6Q9UQ52 1028 aa5.77□□□□□ -1.49
MRPL35-202ENST00000337109 ATXN2Q99700 1313 aaKnown RBP5.77□□□□□ -1.49
MRPL35-202ENST00000337109 GCOM1H8Y6P7 765 aaPredicted RBP5.76□□□□□ -1.49
MRPL35-202ENST00000337109 NFKBIEO00221 500 aa5.76□□□□□ -1.49
MRPL35-202ENST00000337109 TACC1O75410 805 aa5.76□□□□□ -1.49
MRPL35-202ENST00000337109 PALMO75781 387 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms