RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 UNC13DQ70J99 1090 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 PPP1R13LQ8WUF5 828 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 DHX33Q9H6R0 707 aaKnown RBP23.88■■□□□ 1.41
TPM1-204ENST00000334895 PVALEFA0A1B0GWK0 134 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 DGAT1O75907 488 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 MYCNP04198 464 aaPredicted RBP23.88■■□□□ 1.41
TPM1-204ENST00000334895 ASGR1P07306 291 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 IDEP14735 1019 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 ZNF445P59923 1031 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 MAEAQ7L5Y9 396 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 MTG1Q9BT17 334 aaPredicted RBP23.88■■□□□ 1.41
TPM1-204ENST00000334895 ZEB2O60315 1214 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 HIP1RO75146 1068 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 SOX10P56693 466 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 MORC3Q14149 939 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 KCNB1Q14721 858 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 EMC2Q15006 297 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 RNF180Q86T96 592 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 DEFB118Q96PH6 123 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 GPRC5CQ9NQ84 441 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 PANK4Q9NVE7 773 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 PPME1Q9Y570 386 aa23.87■■□□□ 1.41
TPM1-204ENST00000334895 MAFO75444 373 aaPredicted RBP23.86■■□□□ 1.41
TPM1-204ENST00000334895 RHOBTB3O94955 611 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 ZNF131P52739 623 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 TYRO3Q06418 890 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 COASYQ13057 564 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 ZNF484Q5JVG2 852 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 HPS3Q969F9 1004 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 ZBTB10Q96DT7 871 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 ATP6V0A4Q9HBG4 840 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 ODF2LQ9ULJ1 636 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 MYH11P35749 1972 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 COL1A2P08123 1366 aa23.86■■□□□ 1.41
TPM1-204ENST00000334895 SFI1A8K8P3 1242 aa23.85■■□□□ 1.41
TPM1-204ENST00000334895 SMIM10L2AP0DMW4 78 aa23.85■■□□□ 1.41
TPM1-204ENST00000334895 SMIM10L2BP0DMW5 78 aa23.85■■□□□ 1.41
TPM1-204ENST00000334895 RFC5P40937 340 aa23.85■■□□□ 1.41
TPM1-204ENST00000334895 POLGP54098 1239 aaPredicted RBP23.85■■□□□ 1.41
TPM1-204ENST00000334895 CHMP4BP1P59074 171 aa23.85■■□□□ 1.41
TPM1-204ENST00000334895 PPFIA1Q13136 1202 aa23.85■■□□□ 1.41
TPM1-204ENST00000334895 HIC1Q14526 733 aa23.85■■□□□ 1.41
TPM1-204ENST00000334895 SASS6Q6UVJ0 657 aa23.85■■□□□ 1.41
TPM1-204ENST00000334895 PCSK9Q8NBP7 692 aaKnown RBP23.85■■□□□ 1.41
TPM1-204ENST00000334895 KATNAL1Q9BW62 490 aa23.85■■□□□ 1.41
TPM1-204ENST00000334895 IGKV6-21A0A0C4DH24 114 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 C22orf31O95567 290 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 IGBP1P78318 339 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 TBC1D8BQ0IIM8 1120 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 GRIK4Q16099 956 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 MARCH8Q5T0T0 291 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 TRIML1Q8N9V2 468 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 TIPINQ9BVW5 301 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 TMEM106CQ9BVX2 250 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 EXOC1Q9NV70 894 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 SETD4Q9NVD3 440 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 RMND1Q9NWS8 449 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 KAT6AQ92794 2004 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 TBCAO75347 108 aaKnown RBP23.84■■□□□ 1.41
TPM1-204ENST00000334895 ACLYP53396 1101 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 NLRP12P59046 1061 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 MKRN4PQ13434 485 aaPredicted RBP23.84■■□□□ 1.41
TPM1-204ENST00000334895 DPCR1Q3MIW9 517 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 FAM102BQ5T8I3 360 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 LRSAM1Q6UWE0 723 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 SFR1Q86XK3 245 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 CCDC65Q8IXS2 484 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 MCPH1Q8NEM0 835 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 SLC7A3Q8WY07 619 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 PCDHA2Q9Y5H9 948 aa23.84■■□□□ 1.41
TPM1-204ENST00000334895 FAM13AO94988 1023 aa23.83■■□□□ 1.41
TPM1-204ENST00000334895 DRP2Q13474 957 aa23.83■■□□□ 1.41
TPM1-204ENST00000334895 SMYD4Q8IYR2 804 aaPredicted RBP23.83■■□□□ 1.41
TPM1-204ENST00000334895 LMBR1Q8WVP7 490 aa23.83■■□□□ 1.41
TPM1-204ENST00000334895 TSEN34Q9BSV6 310 aaKnown RBP23.83■■□□□ 1.41
TPM1-204ENST00000334895 FGFBP2Q9BYJ0 223 aa23.83■■□□□ 1.41
TPM1-204ENST00000334895 ZHX3Q9H4I2 956 aa23.83■■□□□ 1.41
TPM1-204ENST00000334895 OGDHLQ9ULD0 1010 aa23.83■■□□□ 1.41
TPM1-204ENST00000334895 GDAQ9Y2T3 454 aa23.83■■□□□ 1.41
TPM1-204ENST00000334895 GJB1P08034 283 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 CCDC192P0DO97 292 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 HOXC8P31273 242 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 ADAM17P78536 824 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 STK4Q13043 487 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 NBPF20Q3BBV1 942 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 HERC4Q5GLZ8 1057 aaPredicted RBP23.82■■□□□ 1.4
TPM1-204ENST00000334895 ARRDC4Q8NCT1 418 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 KIAA0895Q8NCT3 520 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 GLIS3Q8NEA6 775 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 TMEM143Q96AN5 459 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 FIZ1Q96SL8 496 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 PARVGQ9HBI0 331 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 HDAC6Q9UBN7 1215 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 COL4A3BPQ9Y5P4 624 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 GRIN2DO15399 1336 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 EVPLQ92817 2033 aa23.82■■□□□ 1.4
TPM1-204ENST00000334895 KLRC1P26715 233 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 STX1AQ16623 288 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 ZNF658Q5TYW1 1059 aaPredicted RBP23.81■■□□□ 1.4
TPM1-204ENST00000334895 MTHFD1LQ6UB35 978 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms