RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PYCARDQ9ULZ3 195 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 HIP1RO75146 1068 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 ERICH1Q86X53 443 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 BEST2Q8NFU1 509 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 ACER1Q8TDN7 264 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 NBPF9Q3BBW0 867 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 XKR3Q5GH77 459 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 C4orf50Q6ZRC1 276 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 CCDC170Q8IYT3 715 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 P3H4Q92791 437 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 SAAL1Q96ER3 474 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 ANAPC4Q9UJX5 808 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 POLIQ9UNA4 740 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 ATF2P15336 505 aa16.21■□□□□ 0.18
C9orf47-201ENST00000334490 EPHX2P34913 555 aa16.21■□□□□ 0.18
C9orf47-201ENST00000334490 KCNH2Q12809 1159 aa16.21■□□□□ 0.18
C9orf47-201ENST00000334490 GTF3C2Q8WUA4 911 aaPredicted RBP16.21■□□□□ 0.18
C9orf47-201ENST00000334490 ATP2A3Q93084 1043 aa16.21■□□□□ 0.18
C9orf47-201ENST00000334490 SLITRK6Q9H5Y7 841 aa16.21■□□□□ 0.18
C9orf47-201ENST00000334490 CPSF3Q9UKF6 684 aaKnown RBP16.21■□□□□ 0.18
C9orf47-201ENST00000334490 PDS5AQ29RF7 1337 aaKnown RBP16.21■□□□□ 0.18
C9orf47-201ENST00000334490 SOWAHDA6NJG2 315 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 SRGAP1Q7Z6B7 1085 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 TUFT1Q9NNX1 390 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.2■□□□□ 0.18
C9orf47-201ENST00000334490 MAD1L1Q9Y6D9 718 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 GPC3P51654 580 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 GUF1Q8N442 669 aaKnown RBP16.2■□□□□ 0.18
C9orf47-201ENST00000334490 AFAP1L1Q8TED9 768 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 STXBP3O00186 592 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 THEM5Q8N1Q8 247 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 MYRIPQ8NFW9 859 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 HINFPQ9BQA5 517 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 KRT1P04264 644 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 CTNNA1P35221 906 aaKnown RBP16.2■□□□□ 0.18
C9orf47-201ENST00000334490 TSC1Q92574 1164 aa16.2■□□□□ 0.18
C9orf47-201ENST00000334490 PASKQ96RG2 1323 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 DEPDC5O75140 1603 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 PRPSAP2O60256 369 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 DDNO94850 711 aaPredicted RBP16.19■□□□□ 0.18
C9orf47-201ENST00000334490 ERCC6LQ2NKX8 1250 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 NAALADL2Q58DX5 795 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 KIF2CQ99661 725 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 PTPN22Q9Y2R2 807 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 AFG3L2Q9Y4W6 797 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 LRRD1A4D1F6 860 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 NDUFA10O95299 355 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 FTCDO95954 541 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 ZNF18P17022 549 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 DYNLT1P63172 113 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 PPFIA1Q13136 1202 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 FYB2Q5VWT5 728 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 CHST13Q8NET6 341 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 PPP1R13BQ96KQ4 1090 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 NGRNQ9NPE2 291 aaKnown RBP16.19■□□□□ 0.18
C9orf47-201ENST00000334490 SGK1O00141 431 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 XPAP23025 273 aaPredicted RBP16.19■□□□□ 0.18
C9orf47-201ENST00000334490 PHBP35232 272 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 ECE1P42892 770 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 VAMP7P51809 220 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 CEP57Q86XR8 500 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 CCSER1Q9C0I3 900 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 GINM1Q9NU53 330 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
C9orf47-201ENST00000334490 FOXN1O15353 648 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 DGAT1O75907 488 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 GH1P01241 217 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 DDR1Q08345 913 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 TMEM270Q6UE05 265 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 SCN4BQ8IWT1 228 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 RYBPQ8N488 228 aaPredicted RBP16.19■□□□□ 0.18
C9orf47-201ENST00000334490 MAP3K14Q99558 947 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 RTFDC1Q9BY42 306 aaPredicted RBP16.19■□□□□ 0.18
C9orf47-201ENST00000334490 SMARCAD1Q9H4L7 1026 aa16.19■□□□□ 0.18
C9orf47-201ENST00000334490 LMNB2Q03252 620 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 UHMK1Q8TAS1 419 aaKnown RBP16.18■□□□□ 0.18
C9orf47-201ENST00000334490 FBXO2Q9UK22 296 aaPredicted RBP16.18■□□□□ 0.18
C9orf47-201ENST00000334490 ZDHHC9Q9Y397 364 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 PFASO15067 1338 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 LGALS16A8MUM7 142 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 RGS16O15492 202 aaPredicted RBP16.18■□□□□ 0.18
C9orf47-201ENST00000334490 EFNA5P52803 228 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 TROAPQ12815 778 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 AGO2Q9UKV8 859 aaKnown RBP16.18■□□□□ 0.18
C9orf47-201ENST00000334490 RPS6P62753 249 aaKnown RBP16.18■□□□□ 0.18
C9orf47-201ENST00000334490 C10orf76Q5T2E6 689 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 ELMSAN1Q6PJG2 1045 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 ERO1BQ86YB8 467 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 URGCPQ8TCY9 931 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 GCNAQ96QF7 691 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 CCDC68Q9H2F9 335 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 CDC23Q9UJX2 597 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 CNTNAP5Q8WYK1 1306 aa16.18■□□□□ 0.18
C9orf47-201ENST00000334490 TBX3O15119 743 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 NMT1P30419 496 aaKnown RBP16.17■□□□□ 0.18
C9orf47-201ENST00000334490 NBPF12Q5TAG4 269 aaPredicted RBP16.17■□□□□ 0.18
C9orf47-201ENST00000334490 AFAP1L2Q8N4X5 818 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 TMEM35BQ8NCS4 154 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 BBOF1Q8ND07 529 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 SCFD2Q8WU76 684 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms