RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SCRN1Q12765 414 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 CAMK1DQ8IU85 385 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 DNAAF3Q8N9W5 541 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 ERLEC1Q96DZ1 483 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 SRCIN1Q9C0H9 1055 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 ALDH1L1O75891 902 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 PRG2P13727 222 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 DDX6P26196 483 aaKnown RBP eCLIP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 KCTD2Q14681 263 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 FBXW10Q5XX13 1052 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 KDELC2Q7Z4H8 507 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 CRBNQ96SW2 442 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 KCNK9Q9NPC2 374 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 KLC4Q9NSK0 619 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 ADAM30Q9UKF2 790 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TTC21AQ8NDW8 1320 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 LIN7AO14910 233 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 PLCL1Q15111 1095 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 PCNX4Q63HM2 1172 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 IFNL1Q8IU54 200 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC33Q8N5R6 958 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 ABHD8Q96I13 439 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 RAB34Q9BZG1 259 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 NSMCE4AQ9NXX6 385 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TRPC5Q9UL62 973 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 INTUQ9ULD6 942 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 DIS3Q9Y2L1 958 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TTI1O43156 1089 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 ATF6P18850 670 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 RNF219Q5W0B1 726 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM199XQ6PEV8 388 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 CAPN12Q6ZSI9 719 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 LEO1Q8WVC0 666 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 CKAP2Q8WWK9 683 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 FHOD1Q9Y613 1164 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARAP1Q96P48 1450 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 PSMD14O00487 310 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAPK13O15264 365 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 GAS2O43903 313 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TRIM49P0CI25 452 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TRIM49CP0CI26 452 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 PPP2R5DQ14738 602 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 EIF2S3LQ2VIR3 472 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 WDR48Q8TAF3 677 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 SPATA18Q8TC71 538 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 RUNDC1Q96C34 613 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM86C1Q9NVL1 165 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 NPHP3Q7Z494 1330 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TRPC5OSA6NMA1 111 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 SPTLC1O15269 473 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TMEM127O75204 238 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 SEMA3DO95025 777 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 CDH11P55287 796 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 POU5F1BQ06416 359 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCSAPQ6IQ19 270 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TRAPPC9Q96Q05 1148 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM118BQ9BPY3 351 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 PRDM11Q9NQV5 511 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM25EA8MYX2 175 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 BTBD18B2RXH4 712 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 KRT16P08779 473 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAP3K12Q12852 859 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 NR5A1Q13285 461 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 PLEKHM3Q6ZWE6 761 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TTC5Q8N0Z6 440 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 MCUQ8NE86 351 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 KLHL29Q96CT2 875 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TATP17735 454 aaPredicted RBP6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM76BQ5HYJ3 339 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 IZUMO3Q5VZ72 239 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 TBC1D19Q8N5T2 526 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 TTLL11Q8NHH1 800 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 TTC8Q8TAM2 541 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAML1Q92585 1016 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 TTC25Q96NG3 672 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 PKIBQ9C010 78 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 ING2Q9H160 280 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 SLFN14P0C7P3 912 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 PRKAR1BP31321 381 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 PPP3CCP48454 512 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 CEBPAP49715 358 aaPredicted RBP6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 VPS39Q96JC1 886 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 AASDHPPTQ9NRN7 309 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC87Q9NVE4 849 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 AMOTL2Q9Y2J4 779 aa6.46□□□□□ -1.37
CDC42BPA-201ENST00000334218 WRBO00258 174 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 POU1F1P28069 291 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 SERPINB3P29508 390 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 CYP4F8P98187 520 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 TRAF2Q12933 501 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 CDC16Q13042 620 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 EDRF1Q3B7T1 1238 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 LEMD2Q8NC56 503 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 UBLCP1Q8WVY7 318 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 ASCC2Q9H1I8 757 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 C19orf44Q9H6X5 657 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 PCDH18Q9HCL0 1135 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF304Q9HCX3 659 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 DYRK1BQ9Y463 629 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms