RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 IRF2BP1Q8IU81 584 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 RPUSD2Q8IZ73 545 aaKnown RBP10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ZNF512BQ96KM6 892 aaPredicted RBP10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 C7orf25Q9BPX7 421 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 HOMER3Q9NSC5 361 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 GMNCA6NCL1 334 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PI4K2BG5E9Z4 385 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 EIF3HO15372 352 aaKnown RBP eCLIP10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 LMNB1P20700 586 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PDE6CP51160 858 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CASC4Q6P4E1 433 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NLRX1Q86UT6 975 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 KIF2BQ8N4N8 673 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 METTL13Q8N6R0 699 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 WHAMMQ8TF30 809 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 FAM84AQ96KN4 292 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 TEKT3Q9BXF9 490 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SYNJ2BP-COX16A0A087WUM0 186 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NKRFO15226 690 aaKnown RBP eCLIP10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SPAG7O75391 227 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CYFIP1Q7L576 1253 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ZNF473Q8WTR7 871 aaKnown RBP10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 C9orf72Q96LT7 481 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NAP1L4Q99733 375 aaKnown RBP10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ACP6Q9NPH0 428 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 COX16Q9P0S2 106 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 KLHL14Q9P2G3 628 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NXF1Q9UBU9 619 aaKnown RBP10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ANAPC7Q9UJX3 599 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 EMSYQ7Z589 1322 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CYP26A1O43174 497 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MED24O75448 989 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MMP10P09238 476 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ATF2P15336 505 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 LIG4P49917 911 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ATP11AP98196 1134 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 TRPC3Q13507 836 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PACS2Q86VP3 889 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SLC35G2Q8TBE7 412 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ANKS1AQ92625 1134 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CEP170P1Q96L14 293 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 IFT74Q96LB3 600 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 EIF2AK1Q9BQI3 630 aaKnown RBP10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 KIFC3Q9BVG8 833 aa10.6□□□□□ -0.71
CSGALNACT1-201ENST00000332246 A0A1B0GUA9 196 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CRKP46108 304 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 RASA3Q14644 834 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 LONRF1Q17RB8 773 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SHROOM1Q2M3G4 852 aaPredicted RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MTERF2Q49AM1 385 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ARHGEF16Q5VV41 709 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ZBTB33Q86T24 672 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 DNAJC7Q99615 494 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 C11orf70Q9BRQ4 267 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 FBXO28Q9NVF7 368 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 TTLL3Q9Y4R7 772 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ARHGAP23Q9P227 1491 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CALCAP01258 141 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 YY1P25490 414 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NSFP46459 744 aaKnown RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ZNF543Q08ER8 600 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MYO1EQ12965 1108 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 STRN3Q13033 797 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PSMD2Q13200 908 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SF3B3Q15393 1217 aaKnown RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 VPS52Q8N1B4 723 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 HNRNPLLQ8WVV9 542 aaKnown RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PBKQ96KB5 322 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PI4K2AQ9BTU6 479 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 TLR10Q9BXR5 811 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PI4KBQ9UBF8 816 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PCDHB4Q9Y5E5 795 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 BZW2Q9Y6E2 419 aaKnown RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 GOLGA8RI6L899 631 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 HSPA1LP34931 641 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 STAT2P52630 851 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 IGBP1P78318 339 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 COG2Q14746 738 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NT5DC1Q5TFE4 455 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 AADACL2Q6P093 401 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CATSPER3Q86XQ3 398 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CHURC1Q8WUH1 139 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MCUR1Q96AQ8 359 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 FAM114A2Q9NRY5 505 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 C1orf112Q9NSG2 853 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SEPT9Q9UHD8 586 aaPredicted RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PEAK1Q9H792 1746 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 HMGB1P1B2RPK0 211 aaPredicted RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SGK1O00141 431 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 C21orf2O43822 256 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 BAG2O95816 211 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 GCFC2P16383 781 aaKnown RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ALDH3A1P30838 453 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 GCKP35557 465 aa10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MDH1P40925 334 aaKnown RBP10.59□□□□□ -0.71
CSGALNACT1-201ENST00000332246 RCAN1P53805 252 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms