RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CDHR1Q96JP9 859 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 SENP7Q9BQF6 1050 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 NOC4LQ9BVI4 516 aaKnown RBP7.28□□□□□ -1.24
SMG1-201ENST00000330588 MTIF3Q9H2K0 278 aaKnown RBP7.28□□□□□ -1.24
SMG1-201ENST00000330588 HIPK3Q9H422 1215 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 EHMT1Q9H9B1 1298 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 ZDHHC3Q9NYG2 299 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 MRVI1Q9Y6F6 885 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 TANC1Q9C0D5 1861 aa7.28□□□□□ -1.24
SMG1-201ENST00000330588 HAS3O00219 553 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 MEIS2O14770 477 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 FIBPO43427 364 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 PPFIA4O75335 1185 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 ARIH2O95376 493 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 F2P00734 622 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 FOSP01100 380 aaPredicted RBP7.27□□□□□ -1.25
SMG1-201ENST00000330588 MAPTP10636 758 aaKnown RBP7.27□□□□□ -1.25
SMG1-201ENST00000330588 EIF2AK2P19525 551 aaKnown RBP7.27□□□□□ -1.25
SMG1-201ENST00000330588 AMPD1P23109 780 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 EVCP57679 992 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 BFSP2Q13515 415 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 NEDD9Q14511 834 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 SHHQ15465 462 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 CELF3Q5SZQ8 465 aaKnown RBP7.27□□□□□ -1.25
SMG1-201ENST00000330588 RPUSD2Q8IZ73 545 aaKnown RBP7.27□□□□□ -1.25
SMG1-201ENST00000330588 CAGE1Q8TC20 777 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 HERVK_113Q902F9 699 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 GPRASP2Q96D09 838 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 TM6SF1Q9BZW5 370 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 IL23AQ9NPF7 189 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 PPP4R2Q9NY27 417 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 NOD1Q9Y239 953 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 PCDHGA11Q9Y5H2 935 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 CENPFP49454 3210 aa7.27□□□□□ -1.25
SMG1-201ENST00000330588 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.26□□□□□ -1.25
SMG1-201ENST00000330588 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.26□□□□□ -1.25
SMG1-201ENST00000330588 ESYT2A0FGR8 921 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 A6NJY4 79 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 ZBTB43O43298 467 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 CAND2O75155 1236 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 PLEKHA8P1O95397 391 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 MYL3P08590 195 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 FAM157BP0CG42 384 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 HOXC8P31273 242 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 ELOAQ14241 798 aaKnown RBP7.26□□□□□ -1.25
SMG1-201ENST00000330588 GRIN2CQ14957 1233 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 RTN1Q16799 776 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 LY6KQ17RY6 165 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 TMEM240Q5SV17 173 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 METTL7BQ6UX53 244 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 FAM43BQ6ZT52 329 aaPredicted RBP7.26□□□□□ -1.25
SMG1-201ENST00000330588 SEPT14Q6ZU15 432 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 FCHSD1Q86WN1 690 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 DHX37Q8IY37 1157 aaKnown RBP7.26□□□□□ -1.25
SMG1-201ENST00000330588 SMARCC2Q8TAQ2 1214 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 AFG1LQ8WV93 481 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 IL17RAQ96F46 866 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 RNPC3Q96LT9 517 aaKnown RBP7.26□□□□□ -1.25
SMG1-201ENST00000330588 PSTPIP2Q9H939 334 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 MTMR10Q9NXD2 777 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 NOVA2Q9UNW9 492 aaKnown RBP7.26□□□□□ -1.25
SMG1-201ENST00000330588 STXBP5LQ9Y2K9 1186 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 USP3Q9Y6I4 520 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 DDX49Q9Y6V7 483 aaKnown RBP7.26□□□□□ -1.25
SMG1-201ENST00000330588 BRCA2P51587 3418 aa7.26□□□□□ -1.25
SMG1-201ENST00000330588 RPLP2P05387 115 aaKnown RBP7.25□□□□□ -1.25
SMG1-201ENST00000330588 UBA1P22314 1058 aaKnown RBP7.25□□□□□ -1.25
SMG1-201ENST00000330588 ADH6P28332 368 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 HOXA13P31271 388 aaPredicted RBP7.25□□□□□ -1.25
SMG1-201ENST00000330588 MRPS9P82933 396 aaKnown RBP7.25□□□□□ -1.25
SMG1-201ENST00000330588 FGD1P98174 961 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 AP3B2Q13367 1082 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 ADCK5Q3MIX3 580 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 C9orf50Q5SZB4 431 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 TMEM63BQ5T3F8 832 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 SAMD5Q5TGI4 173 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 BLOC1S2Q6QNY1 142 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 NIPA1Q7RTP0 329 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 NLRX1Q86UT6 975 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 MICU3Q86XE3 530 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 AFAP1L1Q8TED9 768 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 KAT2BQ92831 832 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 COPS5Q92905 334 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 MYL10Q9BUA6 226 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 USP26Q9BXU7 913 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 RIC8AQ9NPQ8 531 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 GTF2IRD1Q9UHL9 959 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 SERTAD1Q9UHV2 236 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 SNX14Q9Y5W7 946 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 KLF18A0A0U1RQI7 1052 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 GOLGA8AA7E2F4 631 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 GOLGA8BA8MQT2 603 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 C1QTNF9BB2RNN3 333 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 BAIAP3O94812 1187 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 GGPS1O95749 300 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 MYCLP12524 364 aaPredicted RBP7.25□□□□□ -1.25
SMG1-201ENST00000330588 CSF2RAP15509 400 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 RPS6KB1P23443 525 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 EPHB4P54760 987 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 PSMC6P62333 389 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms