RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 OXER1Q8TDS5 423 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 SNRNP27Q8WVK2 155 aaKnown RBP8.11□□□□□ -1.11
TRIM49-201ENST00000329758 ATXN2LQ8WWM7 1075 aaKnown RBP8.11□□□□□ -1.11
TRIM49-201ENST00000329758 MAGOHBQ96A72 148 aaKnown RBP8.11□□□□□ -1.11
TRIM49-201ENST00000329758 HIC2Q96JB3 615 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 ZNF333Q96JL9 665 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 NAP1L3Q99457 506 aaPredicted RBP8.11□□□□□ -1.11
TRIM49-201ENST00000329758 CENPKQ9BS16 269 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 NACA2Q9H009 215 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 SH2D4AQ9H788 454 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 CAPN11Q9UMQ6 739 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 STK38LQ9Y2H1 464 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 LUC7L2Q9Y383 392 aaKnown RBP8.11□□□□□ -1.11
TRIM49-201ENST00000329758 ZNF804BA4D1E1 1349 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 BTBD18B2RXH4 712 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 USP17L12C9JPN9 530 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 USP17L21D6R901 530 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 RNF225M0QZC1 329 aaPredicted RBP8.11□□□□□ -1.11
TRIM49-201ENST00000329758 NVLO15381 856 aaKnown RBP8.11□□□□□ -1.11
TRIM49-201ENST00000329758 TJP3O95049 919 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 RFC4P35249 363 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 VHLP40337 213 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 MATR3P43243 847 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRIM49-201ENST00000329758 PDE6CP51160 858 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 TNNC1P63316 161 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 WTAPQ15007 396 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 UAP1Q16222 522 aaPredicted RBP8.11□□□□□ -1.11
TRIM49-201ENST00000329758 WASHC2DQ5SRD0 308 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 DAB2IPQ5VWQ8 1189 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 HOOK3Q86VS8 718 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 ARL10Q8N8L6 244 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 IFT81Q8WYA0 676 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 LACRTQ9GZZ8 138 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 TBCCD1Q9NVR7 557 aa8.11□□□□□ -1.11
TRIM49-201ENST00000329758 USP15Q9Y4E8 981 aaPredicted RBP8.11□□□□□ -1.11
TRIM49-201ENST00000329758 RTL9Q8NET4 1388 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 ADAMTS3O15072 1205 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 SNX3O60493 162 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 ATP5HO75947 161 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 SUN1O94901 812 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 PLEKHA8P1O95397 391 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 ASLP04424 464 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 ITGA2BP08514 1039 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 VEGFAP15692 232 aaPredicted RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 CCT6AP40227 531 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 HDAC4P56524 1084 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 GPSM2P81274 684 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 OCRLQ01968 901 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 UBE4AQ14139 1066 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 ALX1Q15699 326 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 KLHL10Q6JEL2 608 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 WDR59Q6PJI9 974 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 TMEM110Q86TL2 294 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 IQCF2Q8IXL9 164 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 LRRC34Q8IZ02 419 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 AGGF1Q8N302 714 aaeCLIP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 PIGOQ8TEQ8 1089 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 FBXO41Q8TF61 875 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 WDR60Q8WVS4 1066 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 NR1H4Q96RI1 486 aaPredicted RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 HINFPQ9BQA5 517 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 NACAP1Q9BZK3 213 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 QTRT2Q9H974 415 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 RXFP1Q9HBX9 757 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 TXLNGQ9NUQ3 528 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 STOML1Q9UBI4 398 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 NKX1-2Q9UD57 310 aaPredicted RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 SERTAD1Q9UHV2 236 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 TNKSO95271 1327 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 A0A0J9YVX5 310 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 TTC26A0AVF1 554 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 MACROD2A1Z1Q3 448 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 RCCD1A6NED2 376 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 BTBD19C9JJ37 291 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 WNT7AO00755 349 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 SART1O43290 800 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 HNRNPRO43390 633 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 ACTN4O43707 911 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 GJB6O95452 261 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 HNRNPCP07910 306 aaKnown RBP eCLIP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 USP17L8P0C7I0 530 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 CDC25AP30304 524 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 HIBADHP31937 336 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 MMP13P45452 471 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 SERPINB8P50452 374 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 HPCAP84074 193 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 GSTM4Q03013 218 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 SSRP1Q08945 709 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 RTN1Q16799 776 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 TMEM259Q4ZIN3 620 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 RC3H1Q5TC82 1133 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 NFRKBQ6P4R8 1299 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 MAEAQ7L5Y9 396 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 FBXO33Q7Z6M2 555 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 LONP2Q86WA8 852 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 SLC15A3Q8IY34 581 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 ZNF579Q8NAF0 562 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 NSUN4Q96CB9 384 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 DYNLL2Q96FJ2 89 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 CLMNQ96JQ2 1002 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms