RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 PAK1Q13153 545 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 FSCN1Q16658 493 aaKnown RBP20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 XKR9Q5GH70 373 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 KLHL10Q6JEL2 608 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 DDX12PQ92771 950 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 ZNF830Q96NB3 372 aaPredicted RBP20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 C16orf70Q9BSU1 422 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 UPF3AQ9H1J1 476 aaKnown RBP20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 PGK1P00558 417 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 CPT1AP50416 773 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 ASIC1P78348 528 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 RAD51AP2Q09MP3 1159 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 STIM1Q13586 685 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 PLCB4Q15147 1175 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 COBLL1Q53SF7 1204 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 RINT1Q6NUQ1 792 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 ADSSL1Q8N142 457 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 DNAJC19Q96DA6 116 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 KCNF1Q9H3M0 494 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 DDX20Q9UHI6 824 aaKnown RBP20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 ARID2Q68CP9 1835 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 C6orf222P0C671 652 aaPredicted RBP20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 CDK11BP21127 795 aaKnown RBP20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 PRCPP42785 496 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 GSDMDP57764 484 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 CACNB1Q02641 598 aaPredicted RBP20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 PADI6Q6TGC4 694 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 C1orf186Q6ZWK4 172 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 OTUD6AQ7L8S5 288 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 CTU1Q7Z7A3 348 aaKnown RBP20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 ATP8B4Q8TF62 1192 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 CCDC43Q96MW1 224 aaKnown RBP20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 HMX1Q9NP08 348 aaPredicted RBP20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 XPNPEP3Q9NQH7 507 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 EXOC1Q9NV70 894 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 ERAP1Q9NZ08 941 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 CTNND2Q9UQB3 1225 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 GDAQ9Y2T3 454 aa20.77■□□□□ 0.92
EXOSC3-201ENST00000327304 SLC26A2P50443 739 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 MTERF2Q49AM1 385 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 CDKAL1Q5VV42 579 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 UNC13DQ70J99 1090 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 FAM167AQ96KS9 214 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 CEP170P1Q96L14 293 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 RNPEPQ9H4A4 650 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 CYP26B1Q9NR63 512 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 SAMSN1Q9NSI8 373 aaKnown RBP20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 USO1O60763 962 aaKnown RBP20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 ADAMTS4O75173 837 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 KRT18P05783 430 aaKnown RBP20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 MYL3P08590 195 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 STX17P56962 302 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 SLC9C1Q4G0N8 1177 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 BRDTQ58F21 947 aaPredicted RBP20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 NELFBQ8WX92 580 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 REEP2Q9BRK0 252 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 NIFKQ9BYG3 293 aaKnown RBP20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 POLD4Q9HCU8 107 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 NRBP2Q9NSY0 501 aa20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 BMP2KQ9NSY1 1161 aaPredicted RBP20.76■□□□□ 0.91
EXOSC3-201ENST00000327304 H3BRB1 525 aa20.75■□□□□ 0.91
EXOSC3-201ENST00000327304 GIT2Q14161 759 aa20.75■□□□□ 0.91
EXOSC3-201ENST00000327304 BBXQ8WY36 941 aaPredicted RBP20.75■□□□□ 0.91
EXOSC3-201ENST00000327304 KAT2BQ92831 832 aa20.75■□□□□ 0.91
EXOSC3-201ENST00000327304 DHTKD1Q96HY7 919 aaPredicted RBP20.75■□□□□ 0.91
EXOSC3-201ENST00000327304 TUT1Q9H6E5 874 aaKnown RBP20.75■□□□□ 0.91
EXOSC3-201ENST00000327304 ZNF215Q9UL58 517 aaPredicted RBP20.75■□□□□ 0.91
EXOSC3-201ENST00000327304 TRPC6Q9Y210 931 aa20.75■□□□□ 0.91
EXOSC3-201ENST00000327304 PSMA7O14818 248 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 NKX3-2P78367 333 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 TARBP2Q15633 366 aaKnown RBP20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 TPD52L1Q16890 204 aaPredicted RBP20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 GNASQ5JWF2 1037 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 CTAGE1Q96RT6 745 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 CEP89Q96ST8 783 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 SPC25Q9HBM1 224 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 RSPH10B2B2RC85 870 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 ZBTB42B2RXF5 422 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 F2P00734 622 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 RSPH10BP0C881 870 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 IDEP14735 1019 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 PSMD2Q13200 908 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 LHX8Q68G74 356 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 FILIP1Q7Z7B0 1213 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 LRRC8AQ8IWT6 810 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 NAP1L5Q96NT1 182 aaPredicted RBP20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 UNC93B1Q9H1C4 597 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 KCND2Q9NZV8 630 aa20.74■□□□□ 0.91
EXOSC3-201ENST00000327304 MYCP01106 439 aaPredicted RBP20.73■□□□□ 0.91
EXOSC3-201ENST00000327304 GUCY2CP25092 1073 aa20.73■□□□□ 0.91
EXOSC3-201ENST00000327304 SPAG1Q07617 926 aa20.73■□□□□ 0.91
EXOSC3-201ENST00000327304 MAEAQ7L5Y9 396 aa20.73■□□□□ 0.91
EXOSC3-201ENST00000327304 TMC6Q7Z403 805 aa20.73■□□□□ 0.91
EXOSC3-201ENST00000327304 CACTINQ8WUQ7 758 aaKnown RBP20.73■□□□□ 0.91
EXOSC3-201ENST00000327304 RTN4Q9NQC3 1192 aaKnown RBP20.73■□□□□ 0.91
EXOSC3-201ENST00000327304 HBP1O60381 514 aa20.72■□□□□ 0.91
EXOSC3-201ENST00000327304 MYCNP04198 464 aaPredicted RBP20.72■□□□□ 0.91
EXOSC3-201ENST00000327304 PURAQ00577 322 aaKnown RBP20.72■□□□□ 0.91
EXOSC3-201ENST00000327304 MTFR1Q15390 333 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms