RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GJA9P57773 515 aa16.95■□□□□ 0.3
PRPF3-201ENST00000324862 CNNM4Q6P4Q7 775 aa16.95■□□□□ 0.3
PRPF3-201ENST00000324862 LRRC71Q8N4P6 559 aa16.95■□□□□ 0.3
PRPF3-201ENST00000324862 BBXQ8WY36 941 aaPredicted RBP16.95■□□□□ 0.3
PRPF3-201ENST00000324862 NRBP2Q9NSY0 501 aa16.95■□□□□ 0.3
PRPF3-201ENST00000324862 DDX20Q9UHI6 824 aaKnown RBP16.95■□□□□ 0.3
PRPF3-201ENST00000324862 PCDHA2Q9Y5H9 948 aa16.95■□□□□ 0.3
PRPF3-201ENST00000324862 MYH9P35579 1960 aaKnown RBP16.94■□□□□ 0.3
PRPF3-201ENST00000324862 FRMD3A2A2Y4 597 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 PPP1R3GB7ZBB8 358 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 GUCY2CP25092 1073 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 CPT1AP50416 773 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 STX17P56962 302 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 HIC1Q14526 733 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 KCNB1Q14721 858 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 KIAA0753Q2KHM9 967 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 ZNF658Q5TYW1 1059 aaPredicted RBP16.94■□□□□ 0.3
PRPF3-201ENST00000324862 KSR1Q8IVT5 923 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 BSNDQ8WZ55 320 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 KIFC3Q9BVG8 833 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 LRRC27Q9C0I9 530 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 UNC93B1Q9H1C4 597 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 IKZF4Q9H2S9 585 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 PDLIM7Q9NR12 457 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 PVALEFA0A1B0GWK0 134 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 TBCAO75347 108 aaKnown RBP16.94■□□□□ 0.3
PRPF3-201ENST00000324862 GJB1P08034 283 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 ZNF165P49910 485 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 POLGP54098 1239 aaPredicted RBP16.94■□□□□ 0.3
PRPF3-201ENST00000324862 EMC2Q15006 297 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 MYCT1Q8N699 235 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 SUGCTQ9HAC7 445 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 Q9Y3F1 56 aa16.94■□□□□ 0.3
PRPF3-201ENST00000324862 FAM13AO94988 1023 aa16.93■□□□□ 0.3
PRPF3-201ENST00000324862 F2P00734 622 aa16.93■□□□□ 0.3
PRPF3-201ENST00000324862 NMT1P30419 496 aaKnown RBP16.93■□□□□ 0.3
PRPF3-201ENST00000324862 PRMT2P55345 433 aa16.93■□□□□ 0.3
PRPF3-201ENST00000324862 PURAQ00577 322 aaKnown RBP16.93■□□□□ 0.3
PRPF3-201ENST00000324862 KCNA1Q09470 495 aa16.93■□□□□ 0.3
PRPF3-201ENST00000324862 CCDC65Q8IXS2 484 aa16.93■□□□□ 0.3
PRPF3-201ENST00000324862 ZNF668Q96K58 619 aaPredicted RBP16.93■□□□□ 0.3
PRPF3-201ENST00000324862 FIZ1Q96SL8 496 aa16.93■□□□□ 0.3
PRPF3-201ENST00000324862 DHX33Q9H6R0 707 aaKnown RBP16.93■□□□□ 0.3
PRPF3-201ENST00000324862 CBX8Q9HC52 389 aa16.93■□□□□ 0.3
PRPF3-201ENST00000324862 HMX1Q9NP08 348 aaPredicted RBP16.93■□□□□ 0.3
PRPF3-201ENST00000324862 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
PRPF3-201ENST00000324862 MKRN4PQ13434 485 aaPredicted RBP16.92■□□□□ 0.3
PRPF3-201ENST00000324862 SLC9C1Q4G0N8 1177 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 FAM26FQ5R3K3 315 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 LHX8Q68G74 356 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 TRIML1Q8N9V2 468 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 RMND1Q9NWS8 449 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 DGAT1O75907 488 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 MYBP10242 640 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 PMS1P54277 932 aaKnown RBP16.92■□□□□ 0.3
PRPF3-201ENST00000324862 ZC2HC1CQ53FD0 456 aaPredicted RBP16.92■□□□□ 0.3
PRPF3-201ENST00000324862 ODR4Q5SWX8 454 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 EEF2KMTQ96G04 330 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 ATP6V0A4Q9HBG4 840 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 PARVGQ9HBI0 331 aa16.92■□□□□ 0.3
PRPF3-201ENST00000324862 ZNF215Q9UL58 517 aaPredicted RBP16.92■□□□□ 0.3
PRPF3-201ENST00000324862 TRIM49BA6NDI0 452 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 HBP1O60381 514 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 SLC26A2P50443 739 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 ZNF131P52739 623 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 PEX3P56589 373 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 ZNF200P98182 395 aaPredicted RBP16.91■□□□□ 0.3
PRPF3-201ENST00000324862 TBC1D8BQ0IIM8 1120 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 KCNA10Q16322 511 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 HSP90AA4PQ58FG1 418 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 FAM167AQ96KS9 214 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 UPF3AQ9H1J1 476 aaKnown RBP16.91■□□□□ 0.3
PRPF3-201ENST00000324862 CTNND2Q9UQB3 1225 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 ASGR1P07306 291 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 CLCN3P51790 818 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 MFSD10Q14728 455 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 MARCH8Q5T0T0 291 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 DHX40Q8IX18 779 aaKnown RBP16.91■□□□□ 0.3
PRPF3-201ENST00000324862 NELFCDQ8IXH7 590 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 AOPEPQ8N6M6 819 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 SLC7A3Q8WY07 619 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 PPP1R16BQ96T49 567 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 POLR3FQ9H1D9 316 aaPredicted RBP16.91■□□□□ 0.3
PRPF3-201ENST00000324862 MRPL44Q9H9J2 332 aaKnown RBP16.91■□□□□ 0.3
PRPF3-201ENST00000324862 KCND2Q9NZV8 630 aa16.91■□□□□ 0.3
PRPF3-201ENST00000324862 MAFO75444 373 aaPredicted RBP16.9■□□□□ 0.3
PRPF3-201ENST00000324862 PPFIA1Q13136 1202 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 IQCB1Q15051 598 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 METTL13Q8N6R0 699 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.9■□□□□ 0.3
PRPF3-201ENST00000324862 ODF2LQ9ULJ1 636 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 COL4A3BPQ9Y5P4 624 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 PRPF6O94906 941 aaKnown RBP16.9■□□□□ 0.3
PRPF3-201ENST00000324862 SMIM10L2AP0DMW4 78 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 SMIM10L2BP0DMW5 78 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 KLRC1P26715 233 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 PSEN2P49810 448 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 GRIK4Q16099 956 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 BRDTQ58F21 947 aaPredicted RBP16.9■□□□□ 0.3
PRPF3-201ENST00000324862 CCSAPQ6IQ19 270 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms