RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 FHOD1Q9Y613 1164 aa12.82□□□□□ -0.36
DDR1-223ENST00000324771 HOXA10P31260 410 aaPredicted RBP12.82□□□□□ -0.36
DDR1-223ENST00000324771 ACOT2P49753 483 aa12.82□□□□□ -0.36
DDR1-223ENST00000324771 DYNLT1P63172 113 aa12.82□□□□□ -0.36
DDR1-223ENST00000324771 BRDTQ58F21 947 aaPredicted RBP12.82□□□□□ -0.36
DDR1-223ENST00000324771 REXO1L1PQ8IX06 675 aa12.82□□□□□ -0.36
DDR1-223ENST00000324771 CCDC77Q9BR77 488 aa12.82□□□□□ -0.36
DDR1-223ENST00000324771 MSTO1Q9BUK6 570 aa12.82□□□□□ -0.36
DDR1-223ENST00000324771 TTLL3Q9Y4R7 772 aa12.82□□□□□ -0.36
DDR1-223ENST00000324771 RGPD2P0DJD1 1756 aa12.82□□□□□ -0.36
DDR1-223ENST00000324771 SLCO1A2P46721 670 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 SOX10P56693 466 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 CASP8Q14790 479 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 PPP1R21Q6ZMI0 780 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 FMNL3Q8IVF7 1028 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 CDAN1Q8IWY9 1227 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 LACRTQ9GZZ8 138 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 DDX47Q9H0S4 455 aaKnown RBP12.81□□□□□ -0.36
DDR1-223ENST00000324771 CEP72Q9P209 647 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 FAM198AQ9UFP1 575 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 ATP8A1Q9Y2Q0 1164 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 CCDC151A5D8V7 595 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 KIF4AO95239 1232 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 LMNB1P20700 586 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 STXBP2Q15833 593 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 ANKRD42Q8N9B4 389 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 FAM204AQ9H8W3 233 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 DISP2A7MBM2 1401 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 FGGP02679 453 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 YWHABP31946 246 aaKnown RBP12.81□□□□□ -0.36
DDR1-223ENST00000324771 FUT2Q10981 343 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 SEZ6Q53EL9 994 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 TTI2Q6NXR4 508 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 PROM2Q8N271 834 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 NOA1Q8NC60 698 aaKnown RBP12.81□□□□□ -0.36
DDR1-223ENST00000324771 LRRC45Q96CN5 670 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 RPGRIP1Q96KN7 1286 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 HEMGNQ9BXL5 484 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 HOXC10Q9NYD6 342 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 BZW2Q9Y6E2 419 aaKnown RBP12.81□□□□□ -0.36
DDR1-223ENST00000324771 ZNF233A6NK53 670 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 N4BP1O75113 896 aaKnown RBP12.81□□□□□ -0.36
DDR1-223ENST00000324771 MAPK4P31152 587 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 CAP2P40123 477 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 ADCY8P40145 1251 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 IREB2P48200 963 aaKnown RBP12.81□□□□□ -0.36
DDR1-223ENST00000324771 VSNL1P62760 191 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 EPHA7Q15375 998 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 HAUS1Q96CS2 278 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 CEP63Q96MT8 703 aa12.81□□□□□ -0.36
DDR1-223ENST00000324771 PURBQ96QR8 312 aaKnown RBP12.81□□□□□ -0.36
DDR1-223ENST00000324771 ESYT2A0FGR8 921 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 FAM86B1E9PN63 330 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 ATP2A1O14983 1001 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 FAM86B2P0C5J1 330 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 RPA1P27694 616 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 COG2Q14746 738 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 KIAA0895Q8NCT3 520 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 TADA3O75528 432 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 TBC1D8O95759 1140 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 VAMP7P51809 220 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 FAM160B1Q5W0V3 765 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 NYAP1Q6ZVC0 841 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 TBC1D22BQ9NU19 505 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 ZNF148Q9UQR1 794 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 PCDHA10Q9Y5I2 948 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 A0A1W2PQC6 194 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 TNNC2P02585 160 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 FXR2P51116 673 aaKnown RBP eCLIP12.8□□□□□ -0.362e-6■■■□□ 15.4
DDR1-223ENST00000324771 GNGT1P63211 74 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 PDXDC1Q6P996 788 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 ZNF280CQ8ND82 737 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 CDHR1Q96JP9 859 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 PNMA5Q96PV4 448 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 MRFAP1Q9Y605 127 aa12.8□□□□□ -0.36
DDR1-223ENST00000324771 WNT10BO00744 389 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 CC2D1AQ6P1N0 951 aaPredicted RBP12.79□□□□□ -0.36
DDR1-223ENST00000324771 RHPN2Q8IUC4 686 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 OTUD6BQ8N6M0 293 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 CCDC63Q8NA47 563 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 SLC30A5Q8TAD4 765 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 PPP1R14CQ8TAE6 165 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 ZNF18P17022 549 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 SARSP49591 514 aaKnown RBP12.79□□□□□ -0.36
DDR1-223ENST00000324771 PSMC5P62195 406 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 ZSCAN26Q16670 478 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 TMEM270Q6UE05 265 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 ARFGAP2Q8N6H7 521 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 MSANTD4Q8NCY6 345 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 NLRP7Q8WX94 980 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 ACAD9Q9H845 621 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 PGRMC1O00264 195 aaKnown RBP12.79□□□□□ -0.36
DDR1-223ENST00000324771 FTLP02792 175 aaPredicted RBP12.79□□□□□ -0.36
DDR1-223ENST00000324771 UCHL3P15374 230 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 ZSCAN20P17040 1043 aaPredicted RBP12.79□□□□□ -0.36
DDR1-223ENST00000324771 IFNAR2P48551 515 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 KCNA1Q09470 495 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 C2CD6Q53TS8 623 aa12.79□□□□□ -0.36
DDR1-223ENST00000324771 RINT1Q6NUQ1 792 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms