RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 NR3C1P04150 777 aa17.58■□□□□ 0.4
USHBP1-202ENST00000324554 CORO7P57737 925 aa17.58■□□□□ 0.4
USHBP1-202ENST00000324554 EXOC3L4Q17RC7 722 aa17.58■□□□□ 0.4
USHBP1-202ENST00000324554 PRAMEF18Q5VWM3 479 aa17.58■□□□□ 0.4
USHBP1-202ENST00000324554 ZIM3Q96PE6 472 aa17.58■□□□□ 0.4
USHBP1-202ENST00000324554 CNOT7Q9UIV1 285 aaKnown RBP17.58■□□□□ 0.4
USHBP1-202ENST00000324554 GRIN2DO15399 1336 aa17.58■□□□□ 0.4
USHBP1-202ENST00000324554 TBCAO75347 108 aaKnown RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 HEXIM1O94992 359 aaKnown RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 GCNT3O95395 438 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 RNASE9P60153 205 aaKnown RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 GUCY2DQ02846 1103 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 KCNA1Q09470 495 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 DNAJC21Q5F1R6 531 aaKnown RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 DCAF17Q5H9S7 520 aaPredicted RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 ALS2CLQ60I27 953 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 TTC19Q6DKK2 380 aaPredicted RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 ZNF571Q7Z3V5 609 aaPredicted RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 INPP4AQ96PE3 977 aaPredicted RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 SPAG5Q96R06 1193 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 CAPS2Q9BXY5 557 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 RABEP2Q9H5N1 569 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 EPB41L5Q9HCM4 733 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 HERC5Q9UII4 1024 aaKnown RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 FZD1Q9UP38 647 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 SMCHD1A6NHR9 2005 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 GRID2IPA4D2P6 1211 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 OPA1O60313 960 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 EPB41P11171 864 aaKnown RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 CASP4P49662 377 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 EPHA7Q15375 998 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 TRADDQ15628 312 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 ZBED3Q96IU2 234 aaPredicted RBP17.57■□□□□ 0.4
USHBP1-202ENST00000324554 ZNF541Q9H0D2 1346 aa17.57■□□□□ 0.4
USHBP1-202ENST00000324554 SLC16A3O15427 465 aaKnown RBP17.56■□□□□ 0.4
USHBP1-202ENST00000324554 HSF2BPO75031 334 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 KRT14P02533 472 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 RINT1Q6NUQ1 792 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 IFT20Q8IY31 132 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 RBM46Q8TBY0 533 aaKnown RBP17.56■□□□□ 0.4
USHBP1-202ENST00000324554 IFT81Q8WYA0 676 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 SLC35C1Q96A29 364 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 KRT12Q99456 494 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 HSD17B14Q9BPX1 270 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 WDR18Q9BV38 432 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 OLFML3Q9NRN5 406 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 BTNL10A8MVZ5 291 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 RPL13P26373 211 aaKnown RBP17.56■□□□□ 0.4
USHBP1-202ENST00000324554 MAGEA9P43362 315 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 CTTNQ14247 550 aaKnown RBP17.56■□□□□ 0.4
USHBP1-202ENST00000324554 TCERG1LQ5VWI1 586 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 SLC30A10Q6XR72 485 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 DNAAF5Q86Y56 855 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 PIGOQ8TEQ8 1089 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 METTL14Q9HCE5 456 aaKnown RBP17.56■□□□□ 0.4
USHBP1-202ENST00000324554 ZBTB21Q9ULJ3 1066 aa17.56■□□□□ 0.4
USHBP1-202ENST00000324554 BZW2Q9Y6E2 419 aaKnown RBP17.56■□□□□ 0.4
USHBP1-202ENST00000324554 VGLL3A8MV65 326 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 CLIC2O15247 247 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 CCT5P48643 541 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 STAT2P52630 851 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 GNGT1P63211 74 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 NNTQ13423 1086 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 C10orf76Q5T2E6 689 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 OTOP1Q7RTM1 612 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 SH2D3CQ8N5H7 860 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 KCTD17Q8N5Z5 321 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 MTMR14Q8NCE2 650 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 RUFY1Q96T51 708 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 SIX2Q9NPC8 291 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 COL2A1P02458 1487 aaPredicted RBP17.55■□□□□ 0.4
USHBP1-202ENST00000324554 SFI1A8K8P3 1242 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 EIF3HO15372 352 aaKnown RBP eCLIP17.55■□□□□ 0.4
USHBP1-202ENST00000324554 DGKZQ13574 1117 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 GBP6Q6ZN66 633 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 IQCKQ8N0W5 287 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 CASKIN2Q8WXE0 1202 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 CCDC43Q96MW1 224 aaKnown RBP17.55■□□□□ 0.4
USHBP1-202ENST00000324554 GOLPH3Q9H4A6 298 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 FBXL5Q9UKA1 691 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 AJAP1Q9UKB5 411 aaPredicted RBP17.55■□□□□ 0.4
USHBP1-202ENST00000324554 SYNPO2Q9UMS6 1093 aa17.55■□□□□ 0.4
USHBP1-202ENST00000324554 ZMYM2Q9UBW7 1377 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 ZNF233A6NK53 670 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 TGFB1I1O43294 461 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 SLITRK3O94933 977 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 GAP43P17677 238 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 PRKCIP41743 596 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 KCTD16Q68DU8 428 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 PIK3R5Q8WYR1 880 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 TUFT1Q9NNX1 390 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 GCNT4Q9P109 453 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 PGAP2Q9UHJ9 254 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 NAGPAQ9UK23 515 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 PCDHB13Q9Y5F0 798 aa17.54■□□□□ 0.4
USHBP1-202ENST00000324554 FZD9O00144 591 aa17.53■□□□□ 0.4
USHBP1-202ENST00000324554 CHMP2AO43633 222 aa17.53■□□□□ 0.4
USHBP1-202ENST00000324554 PSMD10O75832 226 aa17.53■□□□□ 0.4
USHBP1-202ENST00000324554 CFBP00751 764 aa17.53■□□□□ 0.4
USHBP1-202ENST00000324554 GUCY2FP51841 1108 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms