RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 TMOD4Q9NZQ9 345 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 TMEM110-MUSTN1A8MSY1 372 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 EVI5O60447 810 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 MARSP56192 900 aaKnown RBP21.63■■□□□ 1.05
CRLF3-201ENST00000324238 H0YGN5 161 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 GCFC2P16383 781 aaKnown RBP21.62■■□□□ 1.05
CRLF3-201ENST00000324238 ZNF76P36508 570 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 MAGOHP61326 146 aaKnown RBP21.62■■□□□ 1.05
CRLF3-201ENST00000324238 GPATCH4Q5T3I0 446 aaKnown RBP21.62■■□□□ 1.05
CRLF3-201ENST00000324238 ETNPPLQ8TBG4 499 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 MAGOHBQ96A72 148 aaKnown RBP21.62■■□□□ 1.05
CRLF3-201ENST00000324238 TDRD3Q9H7E2 651 aaKnown RBP21.62■■□□□ 1.05
CRLF3-201ENST00000324238 NFS1Q9Y697 457 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 TLDC2A0PJX2 215 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 FLOT1O75955 427 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 CPP00450 1065 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 EDRF1Q3B7T1 1238 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 MYCT1Q8N699 235 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 ARHGEF26Q96DR7 871 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 PKD2L1Q9P0L9 805 aa21.62■■□□□ 1.05
CRLF3-201ENST00000324238 PHF20L1A8MW92 1017 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 MSH4O15457 936 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 KRT71Q3SY84 523 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 B4GALNT4Q76KP1 1039 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 SP8Q8IXZ3 490 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 MREGQ8N565 214 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 SLC35G2Q8TBE7 412 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 IPO4Q8TEX9 1081 aaKnown RBP21.61■■□□□ 1.05
CRLF3-201ENST00000324238 ELMO3Q96BJ8 720 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 SH2D3AQ9BRG2 576 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 PCNTO95613 3336 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 SMCHD1A6NHR9 2005 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 F5H6K3 240 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 TBCAO75347 108 aaKnown RBP21.61■■□□□ 1.05
CRLF3-201ENST00000324238 NT5C2P49902 561 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 ICA1Q05084 483 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 KLRC3Q07444 240 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 SF3B2Q13435 895 aaKnown RBP21.61■■□□□ 1.05
CRLF3-201ENST00000324238 LENG9Q96B70 501 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 ERVK-5Q9HDB9 667 aa21.61■■□□□ 1.05
CRLF3-201ENST00000324238 TGFB1I1O43294 461 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 SH3BP5LQ7L8J4 393 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 FRMD5Q7Z6J6 570 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 NT5DC3Q86UY8 548 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 SYT2Q8N9I0 419 aaPredicted RBP21.6■■□□□ 1.05
CRLF3-201ENST00000324238 FRMD3A2A2Y4 597 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 RGL2O15211 777 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 PLCB1Q9NQ66 1216 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 HMGB1P1B2RPK0 211 aaPredicted RBP21.6■■□□□ 1.05
CRLF3-201ENST00000324238 HOXA10P31260 410 aaPredicted RBP21.6■■□□□ 1.05
CRLF3-201ENST00000324238 DRAP1Q14919 205 aaPredicted RBP21.6■■□□□ 1.05
CRLF3-201ENST00000324238 CBWD6Q4V339 395 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 CBWD3Q5JTY5 395 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 CBWD5Q5RIA9 395 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 DCAF12L1Q5VU92 463 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 GPATCH11Q8N954 259 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 CYFIP2Q96F07 1278 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 TRAF3IP3Q9Y228 551 aa21.6■■□□□ 1.05
CRLF3-201ENST00000324238 SPDYE3A6NKU9 549 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 TISP43B9A030 160 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 GH2P01242 217 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 SHBGP04278 402 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 MMP10P09238 476 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 ZBTB48P10074 688 aaPredicted RBP21.59■■□□□ 1.05
CRLF3-201ENST00000324238 ZNF746Q6NUN9 644 aaPredicted RBP21.59■■□□□ 1.05
CRLF3-201ENST00000324238 SIAH1Q8IUQ4 282 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 ACTRT1Q8TDG2 376 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 PBKQ96KB5 322 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 CRAMP1Q96RY5 1269 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 TMX4Q9H1E5 349 aaPredicted RBP21.59■■□□□ 1.05
CRLF3-201ENST00000324238 CD248Q9HCU0 757 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 CALUO43852 315 aaPredicted RBP21.59■■□□□ 1.05
CRLF3-201ENST00000324238 CFBP00751 764 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 FNTAP49354 379 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 PPP1R18Q6NYC8 613 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 CPNE8Q86YQ8 564 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 EIF2AK1Q9BQI3 630 aaKnown RBP21.59■■□□□ 1.05
CRLF3-201ENST00000324238 ACP6Q9NPH0 428 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 DNAJC12Q9UKB3 198 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 SNX24Q9Y343 169 aa21.59■■□□□ 1.05
CRLF3-201ENST00000324238 RPA1P27694 616 aa21.58■■□□□ 1.05
CRLF3-201ENST00000324238 IFFO1Q0D2I5 559 aa21.58■■□□□ 1.05
CRLF3-201ENST00000324238 NBPF9Q3BBW0 867 aa21.58■■□□□ 1.05
CRLF3-201ENST00000324238 CCDC174Q6PII3 467 aa21.58■■□□□ 1.05
CRLF3-201ENST00000324238 EPM2AIP1Q7L775 607 aaPredicted RBP21.58■■□□□ 1.05
CRLF3-201ENST00000324238 CD302Q8IX05 232 aa21.58■■□□□ 1.05
CRLF3-201ENST00000324238 BANK1Q8NDB2 785 aa21.58■■□□□ 1.05
CRLF3-201ENST00000324238 THAP2Q9H0W7 228 aa21.58■■□□□ 1.05
CRLF3-201ENST00000324238 RABGAP1Q9Y3P9 1069 aa21.58■■□□□ 1.05
CRLF3-201ENST00000324238 ECE1P42892 770 aa21.58■■□□□ 1.04
CRLF3-201ENST00000324238 FAM186BQ8IYM0 893 aa21.58■■□□□ 1.04
CRLF3-201ENST00000324238 FAM198AQ9UFP1 575 aa21.58■■□□□ 1.04
CRLF3-201ENST00000324238 DDX20Q9UHI6 824 aaKnown RBP21.57■■□□□ 1.04
CRLF3-201ENST00000324238 GUCY2CP25092 1073 aa21.57■■□□□ 1.04
CRLF3-201ENST00000324238 USP8P40818 1118 aa21.57■■□□□ 1.04
CRLF3-201ENST00000324238 STAT1P42224 750 aa21.57■■□□□ 1.04
CRLF3-201ENST00000324238 MARCKSL1P49006 195 aa21.57■■□□□ 1.04
CRLF3-201ENST00000324238 PLTPP55058 493 aa21.57■■□□□ 1.04
CRLF3-201ENST00000324238 RINT1Q6NUQ1 792 aa21.57■■□□□ 1.04
CRLF3-201ENST00000324238 SLFN12Q8IYM2 578 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms