RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
SMARCD2-202ENST00000323347 MAP3K20Q9NYL2 800 aaKnown RBP17.28■□□□□ 0.36
SMARCD2-202ENST00000323347 DMGDHQ9UI17 866 aaKnown RBP17.28■□□□□ 0.36
SMARCD2-202ENST00000323347 PCDHB13Q9Y5F0 798 aa17.28■□□□□ 0.36
SMARCD2-202ENST00000323347 ZNF536O15090 1300 aa17.28■□□□□ 0.36
SMARCD2-202ENST00000323347 MYH10P35580 1976 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 SFI1A8K8P3 1242 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 IPO5O00410 1097 aaKnown RBP17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 CLIC2O15247 247 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 FERP16591 822 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 KCNA3P22001 575 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 IFI16Q16666 785 aaKnown RBP17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 INPP4AQ96PE3 977 aaPredicted RBP17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 PACSIN1Q9BY11 444 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 TMEM39BQ9GZU3 492 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 GINM1Q9NU53 330 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 ZNRF3Q9ULT6 936 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 FAN1Q9Y2M0 1017 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 LOXHD1Q8IVV2 1947 aa17.27■□□□□ 0.36
SMARCD2-202ENST00000323347 ZBTB39O15060 712 aa17.27■□□□□ 0.35
SMARCD2-202ENST00000323347 PPP1R12BO60237 982 aaPredicted RBP17.27■□□□□ 0.35
SMARCD2-202ENST00000323347 CXCR5P32302 372 aa17.27■□□□□ 0.35
SMARCD2-202ENST00000323347 MCCD1P59942 119 aaPredicted RBP17.27■□□□□ 0.35
SMARCD2-202ENST00000323347 MAPK7Q13164 816 aa17.27■□□□□ 0.35
SMARCD2-202ENST00000323347 DCAF17Q5H9S7 520 aaPredicted RBP17.27■□□□□ 0.35
SMARCD2-202ENST00000323347 HDAC7Q8WUI4 952 aa17.27■□□□□ 0.35
SMARCD2-202ENST00000323347 GCNT4Q9P109 453 aa17.27■□□□□ 0.35
SMARCD2-202ENST00000323347 STIM2Q9P246 746 aa17.27■□□□□ 0.35
SMARCD2-202ENST00000323347 VPS18Q9P253 973 aa17.27■□□□□ 0.35
SMARCD2-202ENST00000323347 CHMP2AO43633 222 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 ZMYND10O75800 440 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 FLOT1O75955 427 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 LYPLA2O95372 231 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 NAP1L1P55209 391 aaKnown RBP17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 NPEPPSP55786 919 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 ARID5AQ03989 594 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 NNTQ13423 1086 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 ZC2HC1CQ53FD0 456 aaPredicted RBP17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 EMBQ6PCB8 327 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 SLC30A10Q6XR72 485 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 HS2ST1Q7LGA3 356 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 SLFN11Q7Z7L1 901 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 FMNL3Q8IVF7 1028 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 CDAN1Q8IWY9 1227 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 FAM178BQ8IXR5 827 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 LRRC57Q8N9N7 239 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 OLIG1Q8TAK6 271 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 CLEC4DQ8WXI8 215 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 CAVIN3Q969G5 261 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 AGPAT3Q9NRZ7 376 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 FBXO28Q9NVF7 368 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 TMEM59LQ9UK28 342 aa17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 DBR1Q9UK59 544 aaKnown RBP17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 AJAP1Q9UKB5 411 aaPredicted RBP17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 ZBTB12Q9Y330 459 aaPredicted RBP17.26■□□□□ 0.35
SMARCD2-202ENST00000323347 PHF20L1A8MW92 1017 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 DHX15O43143 795 aaKnown RBP17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 ZBTB48P10074 688 aaPredicted RBP17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 ITGB5P18084 799 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 FMO5P49326 533 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 ALCAMQ13740 583 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 ALKBH5Q6P6C2 394 aaKnown RBP17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 DAW1Q8N136 415 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 SLC30A5Q8TAD4 765 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 CCDC102AQ96A19 550 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 LXNQ9BS40 222 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 SYT11Q9BT88 431 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 STK33Q9BYT3 514 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 GLIS2Q9BZE0 524 aaPredicted RBP17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 GDF3Q9NR23 364 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 RBM12Q9NTZ6 932 aaKnown RBP17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 UBIAD1Q9Y5Z9 338 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 AGPSO00116 658 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 WDR46O15213 610 aaKnown RBP17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 RPS6KA5O75582 802 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 INPP5BP32019 993 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 STAT1P42224 750 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 TNNT3P45378 269 aaPredicted RBP17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 EPHB4P54760 987 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 GYS2P54840 703 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 UBXN2AP68543 259 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 MUM1L1Q5H9M0 696 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 TCERG1LQ5VWI1 586 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 VPS36Q86VN1 386 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 MCF2L2Q86YR7 1114 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 C12orf56Q8IXR9 622 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 PRPF38AQ8NAV1 312 aaKnown RBP17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 LPAR1Q92633 364 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 PBKQ96KB5 322 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 VEZTQ9HBM0 779 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 POLD4Q9HCU8 107 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 ZNF277Q9NRM2 450 aaPredicted RBP17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 CALCOCO1Q9P1Z2 691 aa17.25■□□□□ 0.35
SMARCD2-202ENST00000323347 P4HBP07237 508 aaKnown RBP17.24■□□□□ 0.35
SMARCD2-202ENST00000323347 ODR4Q5SWX8 454 aa17.24■□□□□ 0.35
SMARCD2-202ENST00000323347 MIGA2Q7L4E1 593 aa17.24■□□□□ 0.35
SMARCD2-202ENST00000323347 MS4A14Q96JA4 679 aa17.24■□□□□ 0.35
SMARCD2-202ENST00000323347 TMEM51Q9NW97 253 aa17.24■□□□□ 0.35
SMARCD2-202ENST00000323347 EHD2Q9NZN4 543 aa17.24■□□□□ 0.35
SMARCD2-202ENST00000323347 COL20A1Q9P218 1284 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms