RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RHOBTB2Q9BYZ6 727 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 PKD2L2Q9NZM6 624 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 ART3Q13508 389 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 SDE2Q6IQ49 451 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 SIX5Q8N196 739 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 MGARPQ8TDB4 240 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 BEGAINQ9BUH8 593 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 CDK12Q9NYV4 1490 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-201ENST00000322507 ZBTB38Q8NAP3 1195 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-201ENST00000322507 RFX1P22670 979 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 ADCY2Q08462 1091 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 FAM89AQ96GI7 184 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 OSBPL3Q9H4L5 887 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 RFX7Q2KHR2 1363 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 MYCLP12524 364 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-201ENST00000322507 USP14P54578 494 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 RUNX1T1Q06455 604 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 CNGA3Q16281 694 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 SKA1Q96BD8 255 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 ZFYVE19Q96K21 471 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 AMNQ9BXJ7 453 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 ARHGEF3Q9NR81 526 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 INTS9Q9NV88 658 aaKnown RBP10.37□□□□□ -0.75
COL12A1-201ENST00000322507 TDRD7Q8NHU6 1098 aaKnown RBP10.37□□□□□ -0.75
COL12A1-201ENST00000322507 SMCR8Q8TEV9 937 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-201ENST00000322507 LSM1O15116 133 aaKnown RBP10.37□□□□□ -0.75
COL12A1-201ENST00000322507 Q4G0T1 1027 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 MFSD14BQ5SR56 506 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 ANKRD36BP1Q96IX9 119 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 PLIN2Q99541 437 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 CARMIL3Q8ND23 1372 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 HSPA13P48723 471 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 ADAM9Q13443 819 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 NSMCE4AQ9NXX6 385 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 PRLP01236 227 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 MYO1EQ12965 1108 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 RFT1Q96AA3 541 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 EPS8L2Q9H6S3 715 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 VIPAS39Q9H9C1 493 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 CCDC162PA2VCL2 907 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 CCDC188H7C350 402 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 DNALI1O14645 258 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-201ENST00000322507 PSMC2P35998 433 aaKnown RBP10.37□□□□□ -0.75
COL12A1-201ENST00000322507 ODR4Q5SWX8 454 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 DSTYKQ6XUX3 929 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 LARGE2Q8N3Y3 721 aa10.37□□□□□ -0.75
COL12A1-201ENST00000322507 DLGAP3O95886 979 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 NR5A1Q13285 461 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 DLGAP5Q15398 846 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 MAN2A1Q16706 1144 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 CC2D1AQ6P1N0 951 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-201ENST00000322507 CARD9Q9H257 536 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 CHMP1AQ9HD42 196 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-201ENST00000322507 RWDD2AQ9UIY3 292 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 CFBP00751 764 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 OLFML3Q9NRN5 406 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 GPC4O75487 556 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 CHEK2O96017 543 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 FAM26FQ5R3K3 315 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 C11orf88Q6PI97 169 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 U2AF1L4Q8WU68 220 aaKnown RBP10.36□□□□□ -0.75
COL12A1-201ENST00000322507 PLIN5Q00G26 463 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 OTUD7BQ6GQQ9 843 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 RHOT2Q8IXI1 618 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 PROM2Q8N271 834 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 PNMA1Q8ND90 353 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 SEPT1Q8WYJ6 367 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 LARP4BQ92615 738 aaKnown RBP10.36□□□□□ -0.75
COL12A1-201ENST00000322507 STAP2Q9UGK3 403 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 TRIM33Q9UPN9 1127 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 ITSN1Q15811 1721 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 PAMP19021 973 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 ATP1A2P50993 1020 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 FBXL13Q8NEE6 735 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 DDI1Q8WTU0 396 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 NT5C1BQ96P26 610 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 RRAGDQ9NQL2 400 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-201ENST00000322507 WDR19Q8NEZ3 1342 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 POLGP54098 1239 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-201ENST00000322507 MYL7Q01449 175 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 TAB1Q15750 504 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 NDUFAF2Q8N183 169 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 GIMAP8Q8ND71 665 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-201ENST00000322507 TUBGCP2Q9BSJ2 902 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 SH3GLB2Q9NR46 395 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 SOX13Q9UN79 622 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 PCDHGA3Q9Y5H0 932 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 ANKRD12Q6UB98 2062 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 TMEM247A6NEH6 219 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 AREL1O15033 823 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 PIK3CAP42336 1068 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 MDM1Q8TC05 714 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 SLC7A3Q8WY07 619 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 SNF8Q96H20 258 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 C8orf37Q96NL8 207 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 TAF4O00268 1085 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 KPNA4O00629 521 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-201ENST00000322507 BAIAP3O94812 1187 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 NACC1Q96RE7 527 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 DBNDD2Q9BQY9 259 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms