RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 STMN2Q93045 179 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 SGSM3Q96HU1 749 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 C8orf37Q96NL8 207 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 VCPKMTQ9H867 229 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 PDHBP11177 359 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 AKR1B1P15121 316 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 CHN1P15882 459 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 CHRNA3P32297 505 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 SOX5P35711 763 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 HSPA9P38646 679 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 MIER3Q7Z3K6 550 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 CCHCR1Q8TD31 782 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 IWS1Q96ST2 819 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 GDF3Q9NR23 364 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 DNAJC17Q9NVM6 304 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 GEMIN8Q9NWZ8 242 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 NOP53Q9NZM5 478 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 THRAP3Q9Y2W1 955 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 SMARCA1P28370 1054 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 HNRNPH3P31942 346 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 MYO1EQ12965 1108 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 ZYXQ15942 572 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 KIAA1755Q5JYT7 1200 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 INTS5Q6P9B9 1019 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 TPCN2Q8NHX9 752 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 HOMER2Q9NSB8 354 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 MTMR4Q9NYA4 1195 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 NARFQ9UHQ1 456 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 MST1RQ04912 1400 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 ELF1P32519 619 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 PEX19P40855 299 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 TTBK2Q6IQ55 1244 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 C16orf86Q6ZW13 317 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 NACC1Q96RE7 527 aa13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 SUCLA2Q9P2R7 463 aaPredicted RBP13.76□□□□□ -0.21
DNMT3A-202ENST00000321117 CYTH3O43739 400 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 EVI5O60447 810 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 ATP2A2P16615 1042 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 MAN1A1P33908 653 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 ITPK1Q13572 414 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 QRICH1Q2TAL8 776 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 CLEC10AQ8IUN9 316 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 PPP1R14CQ8TAE6 165 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 SLC35G2Q8TBE7 412 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 MCUR1Q96AQ8 359 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 ZNF233A6NK53 670 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 DESP17661 470 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 UBXN2AP68543 259 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 CYB5D1Q6P9G0 228 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 CAPN12Q6ZSI9 719 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 KSR1Q8IVT5 923 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 C4orf32Q8N8J7 132 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 MDM1Q8TC05 714 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 RAPGEF5Q92565 580 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 HOOK2Q96ED9 719 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 PPP1R12CQ9BZL4 782 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 ANAPC5Q9UJX4 755 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 AGPSO00116 658 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 ZNF263O14978 683 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 POLR2MP0CAP2 368 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 HOXA13P31271 388 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 MFAP3P55082 362 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 RWDD2BP57060 319 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 ERVK-9P63128 1117 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 CCDC38Q502W7 563 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 CYP4F22Q6NT55 531 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 ANKRD35Q8N283 1001 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 BBOF1Q8ND07 529 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 C3orf20Q8ND61 904 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 FAM20AQ96MK3 541 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 PNMA5Q96PV4 448 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 TEKT3Q9BXF9 490 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 SYNCQ9H7C4 482 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 MLXIPLQ9NP71 852 aa13.75□□□□□ -0.21
DNMT3A-202ENST00000321117 LMTK3Q96Q04 1460 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 TRIM49P0CI25 452 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 TRIM49CP0CI26 452 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 TNFRSF8P28908 595 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 MAPK4P31152 587 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 MXI1P50539 228 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 GPC5P78333 572 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 ZNF543Q08ER8 600 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 LRRC14Q15048 493 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 TRIP13Q15645 432 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 CCDC137Q6PK04 289 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 TRIM59Q8IWR1 403 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 ACTRT1Q8TDG2 376 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 FLT1P17948 1338 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 FER1L4A9Z1Z3 1794 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 CFAP73A6NFT4 308 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 IFNB1P01574 187 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 FTLP02792 175 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 SNAP25P60880 206 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 DOK7Q18PE1 504 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 REEP2Q9BRK0 252 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 ERP44Q9BS26 406 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 WTIPA6NIX2 430 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms