RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 NBPF20Q3BBV1 942 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 ARL6IP4Q66PJ3 421 aaKnown RBP18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 EXT2Q93063 718 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 ATP6V1G3Q96LB4 118 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 ARMCX2Q7L311 632 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 MAP4K1Q92918 833 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 HACD3Q9P035 362 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 ANP32DO95626 131 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 GOLGA8HP0CJ92 632 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 MAP4P27816 1152 aaKnown RBP18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 LINC00301Q8NCQ3 95 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 CEP72Q9P209 647 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 CCDC195A0A1B0GUA6 201 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 SARM1Q6SZW1 724 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 KCNV2Q8TDN2 545 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 hCG_2014768A0A024R1R8 64 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 MAPRE2Q15555 327 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 CDHR1Q96JP9 859 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 CALB1P05937 261 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 OCM2P0CE71 109 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 OCMP0CE72 109 aaPredicted RBP18■□□□□ 0.47
SMCHD1-201ENST00000320876 PMS2P54278 862 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 NDUFAF2Q8N183 169 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 ATP7AQ04656 1500 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 ABCB5Q2M3G0 1257 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 RESP18Q5W5W9 173 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 ZNF555Q8NEP9 628 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 PKD2L2Q9NZM6 624 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 ZBTB38Q8NAP3 1195 aaPredicted RBP18■□□□□ 0.47
SMCHD1-201ENST00000320876 CABLES1Q8TDN4 633 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 LMCD1Q9NZU5 365 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 MTRQ99707 1265 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 MAGEB5Q9BZ81 275 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 TAF1DQ9H5J8 278 aaPredicted RBP18■□□□□ 0.47
SMCHD1-201ENST00000320876 TOM1O60784 492 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 CNPY4Q8N129 248 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 SNF8Q96H20 258 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 BATF3Q9NR55 127 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 PRR23D1E9PI22 279 aaPredicted RBP18■□□□□ 0.47
SMCHD1-201ENST00000320876 PRR23D2P0DMB1 279 aaPredicted RBP18■□□□□ 0.47
SMCHD1-201ENST00000320876 KRT33BQ14525 404 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 ABI1Q8IZP0 508 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 OSBPL9Q96SU4 736 aa18■□□□□ 0.47
SMCHD1-201ENST00000320876 DNAJC17Q9NVM6 304 aaKnown RBP18■□□□□ 0.47
SMCHD1-201ENST00000320876 ANO9A1A5B4 782 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 GRAMD1CQ8IYS0 662 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 NSUN7Q8NE18 718 aaKnown RBP17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 M0R2C6 588 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 KRT14P02533 472 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 KCNA1Q09470 495 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 RNF139Q8WU17 664 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 PAGE5Q96GU1 130 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 DCTN4Q9UJW0 460 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 CLIC2O15247 247 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 WDR47O94967 919 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 ZNF18P17022 549 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 SERPINB4P48594 390 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 KDM4CQ9H3R0 1056 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 ATP6V0A4Q9HBG4 840 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 ALKBH5Q6P6C2 394 aaKnown RBP17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 MB21D1Q8N884 522 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 HEXIM2Q96MH2 286 aaKnown RBP17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 PAGR1Q9BTK6 254 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 ZWILCHQ9H900 591 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 STAP2Q9UGK3 403 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 SEPT3Q9UH03 358 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 HNRNPRO43390 633 aaKnown RBP17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 CIAO1O76071 339 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 EPHB1P54762 984 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 FAM167BQ9BTA0 163 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 EMILIN3Q9NT22 766 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 SUGT1Q9Y2Z0 365 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 TCHHQ07283 1943 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 HIC1Q14526 733 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 RMDN2Q96LZ7 410 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 SFMBT1Q9UHJ3 866 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 ARHGAP31Q2M1Z3 1444 aa17.99■□□□□ 0.47
SMCHD1-201ENST00000320876 LLGL1Q15334 1064 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 RASSF3Q86WH2 238 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 THOC1Q96FV9 657 aaKnown RBP17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 EHD2Q9NZN4 543 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 RCOR1Q9UKL0 485 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 CCNE1P24864 410 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 USP44Q9H0E7 712 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 ANAPC7Q9UJX3 599 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 GYS2P54840 703 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 TSC22D4Q9Y3Q8 395 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 TTC37Q6PGP7 1564 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 INO80B-WBP1J3KQ70 363 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 TBCKQ8TEA7 893 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 EDC3Q96F86 508 aaKnown RBP17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 INO80BQ9C086 356 aaPredicted RBP17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 CYP27A1Q02318 531 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 NSUN2Q08J23 767 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 TJAP1Q5JTD0 557 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 PBXIP1Q96AQ6 731 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 EPN3Q9H201 632 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 SLC30A9Q6PML9 568 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.98■□□□□ 0.471e-6■■■□□ 17.6
SMCHD1-201ENST00000320876 CCDC78A2IDD5 438 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms