RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PACSIN2Q9UNF0 486 aaPredicted RBP16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 ABCB11O95342 1321 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 ENTPD3O75355 529 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 RPA1P27694 616 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 IQCEQ6IPM2 695 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 KDM7AQ6ZMT4 941 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 NLRP14Q86W24 1093 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 CAVIN3Q969G5 261 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 KCTD10Q9H3F6 313 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 NOL4O94818 638 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 DPEP1P16444 411 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 SMTNP53814 917 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 NEDD9Q14511 834 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 PDXDC1Q6P996 788 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 GJB7Q6PEY0 223 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 MIEF2Q96C03 454 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 GOLPH3Q9H4A6 298 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 NRXN2Q9P2S2 1712 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 TLR2O60603 784 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 GAS7O60861 476 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 PPP1R37O75864 691 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 ARP10275 920 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 GUCY2FP51841 1108 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 SEMA3FQ13275 785 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 SFMBT2Q5VUG0 894 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 ZNF572Q7Z3I7 529 aaPredicted RBP16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 PACSIN1Q9BY11 444 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 HDAC9Q9UKV0 1011 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 FZD1Q9UP38 647 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 CYP3A7-CYP3A51PA0A087WV96 503 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 GCOM1H8Y6P7 765 aaPredicted RBP16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 POLR2MP0CAP2 368 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 CYP3A7P24462 503 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 RDXP35241 583 aaKnown RBP16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 COG2Q14746 738 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 RPAINQ86UA6 219 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 IFT81Q8WYA0 676 aa16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 NAP1L4Q99733 375 aaKnown RBP16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 ARMCX3Q9UH62 379 aaPredicted RBP16.96■□□□□ 0.31
SHROOM1-201ENST00000319854 A0A1W2PQJ5 194 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 TACC1O75410 805 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 FTCDO95954 541 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 NR1D1P20393 614 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 HOXD13P35453 343 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 YTHDF3Q7Z739 585 aaKnown RBP16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 KIRREL3Q8IZU9 778 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 CRYGNQ8WXF5 182 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 GOPCQ9HD26 462 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 DDX20Q9UHI6 824 aaKnown RBP16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 VAV3Q9UKW4 847 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 AKAP3O75969 853 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 FAM13AO94988 1023 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 EGFRP00533 1210 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 FOSP01100 380 aaPredicted RBP16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 COBLL1Q53SF7 1204 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 C6orf89Q6UWU4 347 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 SPAG5Q96R06 1193 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 PAGR1Q9BTK6 254 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 MRIQ9BWK5 157 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 ZNF341Q9BYN7 854 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 ODF2LQ9ULJ1 636 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 E7EVH7 732 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 KLHL30Q0D2K2 578 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 KNOP1Q1ED39 458 aaKnown RBP16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 SLC9C1Q4G0N8 1177 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 HYIQ5T013 277 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 TRIM59Q8IWR1 403 aa16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 SYT2Q8N9I0 419 aaPredicted RBP16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 PPANQ9NQ55 473 aaKnown RBP16.95■□□□□ 0.3
SHROOM1-201ENST00000319854 DNM1LO00429 736 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 CYP2J2P51589 502 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 FIGNQ5HY92 759 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 CFAP58Q5T655 872 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 WLSQ5T9L3 541 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 CEP57Q86XR8 500 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 TRIM58Q8NG06 486 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 ZNF577Q9BSK1 485 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 SH2D4AQ9H788 454 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 WRAP73Q9P2S5 460 aaPredicted RBP16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 BACH1O14867 736 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 MDH1P40925 334 aaKnown RBP16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 Q4G0T1 1027 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 PRAMEF18Q5VWM3 479 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 C8orf74Q6P047 294 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 LDHDQ86WU2 507 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 EPB41L5Q9HCM4 733 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 TMX2Q9Y320 296 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 SIPA1L1O43166 1804 aa16.94■□□□□ 0.3
SHROOM1-201ENST00000319854 A0A087X0T9 212 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 TMEM150BA6NC51 233 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 SORBS3O60504 671 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 FAM228BP0C875 321 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 ITIH3Q06033 890 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 CEP85LQ5SZL2 805 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 CCDC181Q5TID7 509 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 HGSNATQ68CP4 663 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 RINT1Q6NUQ1 792 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 SPATS2Q86XZ4 545 aaKnown RBP16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 FAM20AQ96MK3 541 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 HERC5Q9UII4 1024 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms