RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 AP3B1O00203 1094 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 ATP1A1P05023 1023 aaKnown RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 SOX5P35711 763 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 TFAP4Q01664 338 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 RBBP7Q16576 425 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 COL4A3BPQ9Y5P4 624 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 GNAT1P11488 350 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 RAB14P61106 215 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 PLOD1Q02809 727 aaPredicted RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 PPP6R3Q5H9R7 873 aaPredicted RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 BNIPLQ7Z465 357 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 BBS2Q9BXC9 721 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 A0A1W2PP64 1363 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 KRT7P08729 469 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 TARSP26639 723 aaKnown RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 LSP1P33241 339 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 VSNL1P62760 191 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 MED21Q13503 144 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 TRIP10Q15642 601 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 TEKT4Q8WW24 435 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 STK24Q9Y6E0 443 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 NPATQ14207 1427 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 POLR3AO14802 1390 aaPredicted RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 PYGBP11216 843 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 ARFIP2P53365 341 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 MFSD4BQ5TF39 518 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 CCDC149Q6ZUS6 474 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 PHF21AQ96BD5 680 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 HPCAL4Q9UM19 191 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 MYH11P35749 1972 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 TRIM49BA6NDI0 452 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 DGKIO75912 1065 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 TAF1BQ53T94 588 aaPredicted RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 ARHGEF16Q5VV41 709 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 SEC16BQ96JE7 1060 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 NT5C1BQ96P26 610 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 SYTL2Q9HCH5 934 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 GOLGA8CPA6NN73 597 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 PLA2G4DQ86XP0 818 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 GOLPH3LQ9H4A5 285 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 ZNF658Q5TYW1 1059 aaPredicted RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 PDE5AO76074 875 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 SNX19Q92543 992 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 DHTKD1Q96HY7 919 aaPredicted RBP9.31□□□□□ -0.92
USF3-201ENST00000316407 CLMNQ96JQ2 1002 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 BEGAINQ9BUH8 593 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 VPS11Q9H270 941 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 MAN2A1Q16706 1144 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 CC2D2BQ6DHV5 1058 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 PDXDC1Q6P996 788 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 MCF2L2Q86YR7 1114 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 ESRRBO95718 433 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 PDHBP11177 359 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 BRAFP15056 766 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 PLCG1P19174 1290 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 ZNF589Q86UQ0 364 aaPredicted RBP9.31□□□□□ -0.92
USF3-201ENST00000316407 CCDC24Q8N4L8 307 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 KCTD17Q8N5Z5 321 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 CHN1P15882 459 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 BTN2A2Q8WVV5 523 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 HEY1Q9Y5J3 304 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 HSPA9P38646 679 aaKnown RBP9.31□□□□□ -0.92
USF3-201ENST00000316407 MDH1P40925 334 aaKnown RBP9.31□□□□□ -0.92
USF3-201ENST00000316407 PPP1R16BQ96T49 567 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 LSG1Q9H089 658 aaKnown RBP9.31□□□□□ -0.92
USF3-201ENST00000316407 IL1RL2Q9HB29 575 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 OCM2P0CE71 109 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 OCMP0CE72 109 aaPredicted RBP9.31□□□□□ -0.92
USF3-201ENST00000316407 PRKG1Q13976 671 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 UNC5CLQ8IV45 518 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 ZNF555Q8NEP9 628 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 ZCRB1Q8TBF4 217 aaKnown RBP9.31□□□□□ -0.92
USF3-201ENST00000316407 MYH13Q9UKX3 1938 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 A0A1W2PQ27 194 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 A0A1W2PQ64 194 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 A0A1W2PQD8 194 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 MYO1GB0I1T2 1018 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 CORO7P57737 925 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 MTF1Q14872 753 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 LONRF1Q17RB8 773 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 RGS5O15539 181 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 RIN3Q8TB24 985 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 SYNGAP1Q96PV0 1343 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 SLC9A1P19634 815 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 PSMA2P25787 234 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 COG1Q8WTW3 980 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 SMARCAL1Q9NZC9 954 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 DBR1Q9UK59 544 aaKnown RBP9.31□□□□□ -0.92
USF3-201ENST00000316407 FGAP02671 866 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 MFAP3P55082 362 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 HIC2Q96JB3 615 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 ZC3H12CQ9C0D7 883 aaKnown RBP9.31□□□□□ -0.92
USF3-201ENST00000316407 POTEB3A0JP26 581 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 POTEBQ6S5H4 581 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 TRPM8Q7Z2W7 1104 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 GLT8D2Q9H1C3 349 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 CUEDC2Q9H467 287 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 PKD2L2Q9NZM6 624 aa9.31□□□□□ -0.92
USF3-201ENST00000316407 LRRC53A6NM62 1247 aa9.3□□□□□ -0.92
USF3-201ENST00000316407 PRPSAP2O60256 369 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms