RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 SEPT10Q9P0V9 454 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ADAMTS1Q9UHI8 967 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SLC12A2P55011 1212 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 JPH1Q9HDC5 661 aaPredicted RBP13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SCINQ9Y6U3 715 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CTNND1O60716 968 aaKnown RBP13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 KRT1P04264 644 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SCARA5Q6ZMJ2 495 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ARMCX2Q7L311 632 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.84□□□□□ -0.195e-7■□□□□ 9.4
SH3PXD2A-201ENST00000315994 MAD2L2Q9UI95 211 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 C7orf31Q8N865 590 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 TOPORSQ9NS56 1045 aaPredicted RBP13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 GGA3Q9NZ52 723 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 OATP04181 439 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 VAMP7P51809 220 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ZNF568Q3ZCX4 644 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SGO2Q562F6 1265 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CALR3Q96L12 384 aaKnown RBP13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ESYT2A0FGR8 921 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SH3BP5O60239 455 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SRGNP10124 158 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 FAM213AQ9BRX8 229 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 TRIM9Q9C026 710 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 DAAM1Q9Y4D1 1078 aa13.84□□□□□ -0.19
SH3PXD2A-201ENST00000315994 LRRC53A6NM62 1247 aa13.83□□□□□ -0.19
SH3PXD2A-201ENST00000315994 HIP1RO75146 1068 aa13.83□□□□□ -0.19
SH3PXD2A-201ENST00000315994 YWHABP31946 246 aaKnown RBP13.83□□□□□ -0.19
SH3PXD2A-201ENST00000315994 GCLMP48507 274 aa13.83□□□□□ -0.19
SH3PXD2A-201ENST00000315994 OR6B2Q6IFH4 312 aa13.83□□□□□ -0.19
SH3PXD2A-201ENST00000315994 TMEM39BQ9GZU3 492 aa13.83□□□□□ -0.19
SH3PXD2A-201ENST00000315994 LRRC4Q9HBW1 653 aa13.83□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ZDHHC15Q96MV8 337 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 C7orf25Q9BPX7 421 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SLC38A10Q9HBR0 1119 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MED4Q9NPJ6 270 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 HOMER3Q9NSC5 361 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PTPN22Q9Y2R2 807 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SGK1O00141 431 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 A0A1W2PQC6 194 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GIPC1O14908 333 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CLGNO14967 610 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GRIN3BO60391 1043 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ECEL1O95672 775 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MMP14P50281 582 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GPC3P51654 580 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RHPN2Q8IUC4 686 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 DAGLBQ8NCG7 672 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MRPL4Q9BYD3 311 aaKnown RBP13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SALL1Q9NSC2 1324 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 IL1R1P14778 569 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 EPHB4P54760 987 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TROAPQ12815 778 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 DPYDQ12882 1025 aa13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RSRC2Q7L4I2 434 aaKnown RBP13.83□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MYO5BQ9ULV0 1848 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PDXKO00764 312 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 HEXIM1O94992 359 aaKnown RBP13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PRPSAP1Q14558 356 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CCDC13Q8IYE1 715 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SIX6OS1Q8N1H7 587 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 C3P01024 1663 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 STX2P32856 288 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 BAATQ14032 418 aaPredicted RBP13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 FRMD5Q7Z6J6 570 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ERICH1Q86X53 443 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GTF3C2Q8WUA4 911 aaPredicted RBP13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RTFDC1Q9BY42 306 aaPredicted RBP13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 KCND2Q9NZV8 630 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 LCMT1Q9UIC8 334 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ITKQ08881 620 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ARID5BQ14865 1188 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TOGARAM2Q6ZUX3 1019 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CCHCR1Q8TD31 782 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 DEFB129Q9H1M3 183 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 DIS3Q9Y2L1 958 aaKnown RBP13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 NOC2LQ9Y3T9 749 aaKnown RBP13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MCF2LO15068 1137 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ARL4AP40617 200 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 C2orf54Q08AI8 447 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 VPS52Q8N1B4 723 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GSDMBQ8TAX9 411 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 POLD4Q9HCU8 107 aa13.82□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ATP8B1O43520 1251 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TBXAS1P24557 533 aaPredicted RBP13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PSMC4P43686 418 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TGFB2P61812 414 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SNAPC2Q13487 334 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ZNF699Q32M78 642 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 DSTYKQ6XUX3 929 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GPD1LQ8N335 351 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RGL1Q9NZL6 768 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CXCR5P32302 372 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 KRT39Q6A163 491 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 HAUS6Q7Z4H7 955 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 KCTD17Q8N5Z5 321 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SMC1BQ8NDV3 1235 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 INTS2Q9H0H0 1204 aaKnown RBP13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PRPSAP2O60256 369 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 HOXD10P28358 340 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms