RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 GFPT1Q06210 699 aaPredicted RBP14.63□□□□□ -0.07
CLCN6-201ENST00000312413 HSPH1Q92598 858 aa14.63□□□□□ -0.07
CLCN6-201ENST00000312413 EXT2Q93063 718 aa14.63□□□□□ -0.07
CLCN6-201ENST00000312413 EIF4E1BA6NMX2 242 aaKnown RBP14.63□□□□□ -0.07
CLCN6-201ENST00000312413 CHRNA3P32297 505 aa14.63□□□□□ -0.07
CLCN6-201ENST00000312413 COPS2P61201 443 aa14.63□□□□□ -0.07
CLCN6-201ENST00000312413 MKRN3Q13064 507 aaKnown RBP14.63□□□□□ -0.07
CLCN6-201ENST00000312413 LCORLQ8N3X6 602 aa14.63□□□□□ -0.07
CLCN6-201ENST00000312413 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.63□□□□□ -0.072e-8■■□□□ 13.2
CLCN6-201ENST00000312413 HEMGNQ9BXL5 484 aa14.63□□□□□ -0.07
CLCN6-201ENST00000312413 CCDC90BQ9GZT6 254 aa14.63□□□□□ -0.07
CLCN6-201ENST00000312413 DDX47Q9H0S4 455 aaKnown RBP14.63□□□□□ -0.07
CLCN6-201ENST00000312413 STX18Q9P2W9 335 aaKnown RBP14.63□□□□□ -0.07
CLCN6-201ENST00000312413 AKT3Q9Y243 479 aa14.63□□□□□ -0.07
CLCN6-201ENST00000312413 INPP5FQ9Y2H2 1132 aa14.63□□□□□ -0.07
CLCN6-201ENST00000312413 PLXNC1O60486 1568 aa14.63□□□□□ -0.07
CLCN6-201ENST00000312413 TARSL2A2RTX5 802 aaKnown RBP14.62□□□□□ -0.07
CLCN6-201ENST00000312413 MEFVO15553 781 aaPredicted RBP14.62□□□□□ -0.07
CLCN6-201ENST00000312413 KANSL2Q9H9L4 492 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 FAM187AA6NFU0 413 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 KRT4P19013 534 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 PAMP19021 973 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 METTL23Q86XA0 190 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 ZNF711Q9Y462 761 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 KCNA4P22459 653 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 CDHR1Q96JP9 859 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 NGRNQ9NPE2 291 aaKnown RBP14.62□□□□□ -0.07
CLCN6-201ENST00000312413 PAPOLAP51003 745 aaKnown RBP14.62□□□□□ -0.07
CLCN6-201ENST00000312413 DAB2P98082 770 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 FMR1NBQ8N0W7 255 aaPredicted RBP14.62□□□□□ -0.07
CLCN6-201ENST00000312413 PARD3BQ8TEW8 1205 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 SCG3Q8WXD2 468 aaKnown RBP14.62□□□□□ -0.07
CLCN6-201ENST00000312413 HEXIM2Q96MH2 286 aaKnown RBP14.62□□□□□ -0.07
CLCN6-201ENST00000312413 VPS11Q9H270 941 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 BHMT2Q9H2M3 363 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 SLITRK6Q9H5Y7 841 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 NEO1Q92859 1461 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 hCG_2014768A0A024R1R8 64 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 CFAP69A5D8W1 941 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 TRIM49BA6NDI0 452 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 SLC26A7Q8TE54 656 aa14.62□□□□□ -0.07
CLCN6-201ENST00000312413 GFM2Q969S9 779 aaKnown RBP14.62□□□□□ -0.07
CLCN6-201ENST00000312413 OLA1Q9NTK5 396 aaKnown RBP14.62□□□□□ -0.07
CLCN6-201ENST00000312413 ABCA5Q8WWZ7 1642 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 GOLGA8IPA6NC78 632 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 GOLGA8JA6NMD2 632 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 SERPINB2P05120 415 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 LRRC14Q15048 493 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 PROSER3Q2NL68 480 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 ARL13BQ3SXY8 428 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 RNF217Q8TC41 542 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 ATG3Q9NT62 314 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 GTSE1Q9NYZ3 720 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 LCMT1Q9UIC8 334 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 GTPBP10A4D1E9 387 aaKnown RBP14.61□□□□□ -0.07
CLCN6-201ENST00000312413 CCDC22O60826 627 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 PPP1R37O75864 691 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 ZNF18P17022 549 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 CCDC92Q53HC0 331 aaPredicted RBP14.61□□□□□ -0.07
CLCN6-201ENST00000312413 RARS2Q5T160 578 aaKnown RBP14.61□□□□□ -0.07
CLCN6-201ENST00000312413 USP17L2Q6R6M4 530 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 TTLL11Q8NHH1 800 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 ATP10AO60312 1499 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 DIAPH2O60879 1101 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 CDO1Q16878 200 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 DOK7Q18PE1 504 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 ANGPTL8Q6UXH0 198 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 BATF3Q9NR55 127 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 ADA2Q9NZK5 511 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 HDAC6Q9UBN7 1215 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 NCK2O43639 380 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 IFNA8P32881 189 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 HABP4Q5JVS0 413 aaKnown RBP14.61□□□□□ -0.07
CLCN6-201ENST00000312413 ARMCX2Q7L311 632 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 TRAF3IP3Q9Y228 551 aa14.61□□□□□ -0.07
CLCN6-201ENST00000312413 BMP3P12645 472 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 GUCY1A3Q02108 690 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 SCARA5Q6ZMJ2 495 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 ZBTB33Q86T24 672 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 GOLPH3LQ9H4A5 285 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 SH3GLB2Q9NR46 395 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 SIRT2Q8IXJ6 389 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 FBXL5Q9UKA1 691 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 SUFUQ9UMX1 484 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 PPARGP37231 505 aaPredicted RBP14.6□□□□□ -0.07
CLCN6-201ENST00000312413 UBE2SQ16763 222 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 PPP6R3Q5H9R7 873 aaPredicted RBP14.6□□□□□ -0.07
CLCN6-201ENST00000312413 PPM1NQ8N819 430 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 RAPGEF5Q92565 580 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 SERPINB13Q9UIV8 391 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 GOLGA8MH3BSY2 632 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 RAP1GDS1P52306 607 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 EFTUD2Q15029 972 aaKnown RBP eCLIP14.6□□□□□ -0.072e-6■■■■□ 24.5
CLCN6-201ENST00000312413 FAM83BQ5T0W9 1011 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 TMEM35BQ8NCS4 154 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 CYP4F11Q9HBI6 524 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 TTC7AQ9ULT0 858 aaPredicted RBP14.6□□□□□ -0.07
CLCN6-201ENST00000312413 PRCPP42785 496 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 SLFN12LQ6IEE8 588 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 OR9Q1Q8NGQ5 310 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms