RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 HVCN1Q96D96 273 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 KIFC3Q9BVG8 833 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 RUSC1Q9BVN2 902 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 CELF4Q9BZC1 486 aaKnown RBP13.74□□□□□ -0.21
RETREG3-201ENST00000309428 MTRF1LQ9UGC7 380 aaKnown RBP13.74□□□□□ -0.21
RETREG3-201ENST00000309428 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
RETREG3-201ENST00000309428 ABCC6O95255 1503 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 MYH6P13533 1939 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 ALDH1B1P30837 517 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 PBX1P40424 430 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 MDH1P40925 334 aaKnown RBP13.74□□□□□ -0.21
RETREG3-201ENST00000309428 SOX10P56693 466 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 MIIPQ5JXC2 388 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 EEPD1Q7L9B9 569 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 CCDC50Q8IVM0 306 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 FAM178BQ8IXR5 827 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 PRPF38AQ8NAV1 312 aaKnown RBP13.74□□□□□ -0.21
RETREG3-201ENST00000309428 LMBR1Q8WVP7 490 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 KLHL29Q96CT2 875 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 SLC40A1Q9NP59 571 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 PKD1L3Q7Z443 1732 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 ANO9A1A5B4 782 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 RAD51CO43502 376 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 ELF1P32519 619 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 JAG1P78504 1218 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 TRIP13Q15645 432 aaPredicted RBP13.73□□□□□ -0.21
RETREG3-201ENST00000309428 HAUS3Q68CZ6 603 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 LMBRD2Q68DH5 695 aaPredicted RBP13.73□□□□□ -0.21
RETREG3-201ENST00000309428 CCDC13Q8IYE1 715 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 ARHGEF35A5YM69 484 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 H2AFZP0C0S5 128 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 DLATP10515 647 aaKnown RBP13.73□□□□□ -0.21
RETREG3-201ENST00000309428 ZBTB16Q05516 673 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 H2AFVQ71UI9 128 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 INTS8Q75QN2 995 aaKnown RBP13.73□□□□□ -0.21
RETREG3-201ENST00000309428 PARP9Q8IXQ6 854 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 KIF2BQ8N4N8 673 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 BICD1Q96G01 975 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 EPN3Q9H201 632 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 EML1O00423 815 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 FGGP02679 453 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 FGRP09769 529 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 EPB41P11171 864 aaKnown RBP13.73□□□□□ -0.21
RETREG3-201ENST00000309428 TNFAIP3P21580 790 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 TMEM132AQ24JP5 1023 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 HS2ST1Q7LGA3 356 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 SPDL1Q96EA4 605 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 AGBL1Q96MI9 1066 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 C7orf25Q9BPX7 421 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 SWAP70Q9UH65 585 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 RASAL2Q9UJF2 1139 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
RETREG3-201ENST00000309428 TARSL2A2RTX5 802 aaKnown RBP13.72□□□□□ -0.21
RETREG3-201ENST00000309428 LAD1O00515 517 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 CLGNO14967 610 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 FLOT1O75955 427 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 MMEP08473 750 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 SNX1Q13596 522 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 KCNB1Q14721 858 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 GLYCTKQ8IVS8 523 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 MYCBPAPQ8TBZ2 947 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 DNAJC18Q9H819 358 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 RIC8AQ9NPQ8 531 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 AMFRQ9UKV5 643 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 MYH7P12883 1935 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 K7ENM7 598 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 PLCB3Q01970 1234 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 GSTA5Q7RTV2 222 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 HOOK3Q86VS8 718 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 TRIM51Q9BSJ1 452 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
RETREG3-201ENST00000309428 DHX36Q9H2U1 1008 aaKnown RBP13.72□□□□□ -0.21
RETREG3-201ENST00000309428 RAVER2Q9HCJ3 691 aaKnown RBP13.72□□□□□ -0.21
RETREG3-201ENST00000309428 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 PDE4DIPQ5VU43 2346 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
RETREG3-201ENST00000309428 PEX10O60683 326 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 ACSL3O95573 720 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 NPR1P16066 1061 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 CYP11B2P19099 503 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 ATP11AP98196 1134 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 EPC2Q52LR7 807 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 ALKBH5Q6P6C2 394 aaKnown RBP13.72□□□□□ -0.21
RETREG3-201ENST00000309428 FAM47EQ6ZV65 393 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 DPH6Q7L8W6 267 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 SP8Q8IXZ3 490 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 ARHGEF2Q92974 986 aaKnown RBP13.72□□□□□ -0.21
RETREG3-201ENST00000309428 CYFIP2Q96F07 1278 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 ZNF577Q9BSK1 485 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 ZNF341Q9BYN7 854 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.72□□□□□ -0.21
RETREG3-201ENST00000309428 GEMIN8Q9NWZ8 242 aaKnown RBP13.72□□□□□ -0.21
RETREG3-201ENST00000309428 PNMA2Q9UL42 364 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 CCPG1Q9ULG6 757 aa13.72□□□□□ -0.21
RETREG3-201ENST00000309428 PGRMC1O00264 195 aaKnown RBP13.71□□□□□ -0.21
RETREG3-201ENST00000309428 ZBTB7AO95365 584 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 GCLMP48507 274 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 STAT2P52630 851 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 SCFD1Q8WVM8 642 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms