RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 CYFIP1Q7L576 1253 aa24.7■■□□□ 1.54
PDLIM2-202ENST00000308354 SEL1LQ9UBV2 794 aa24.7■■□□□ 1.54
PDLIM2-202ENST00000308354 EIF3DO15371 548 aaKnown RBP eCLIP24.69■■□□□ 1.54
PDLIM2-202ENST00000308354 STAM2O75886 525 aa24.69■■□□□ 1.54
PDLIM2-202ENST00000308354 AKAP3O75969 853 aa24.69■■□□□ 1.54
PDLIM2-202ENST00000308354 ACTR2P61160 394 aa24.69■■□□□ 1.54
PDLIM2-202ENST00000308354 WDR78Q5VTH9 848 aa24.69■■□□□ 1.54
PDLIM2-202ENST00000308354 SENP7Q9BQF6 1050 aa24.69■■□□□ 1.54
PDLIM2-202ENST00000308354 NUP58Q9BVL2 599 aa24.69■■□□□ 1.54
PDLIM2-202ENST00000308354 CCDC60Q8IWA6 550 aaPredicted RBP24.69■■□□□ 1.54
PDLIM2-202ENST00000308354 RETREG2Q8NC44 543 aa24.69■■□□□ 1.54
PDLIM2-202ENST00000308354 CRACR2AQ9BSW2 395 aa24.69■■□□□ 1.54
PDLIM2-202ENST00000308354 ABL1P00519 1130 aa24.68■■□□□ 1.54
PDLIM2-202ENST00000308354 OSBPP22059 807 aa24.68■■□□□ 1.54
PDLIM2-202ENST00000308354 MARSP56192 900 aaKnown RBP24.68■■□□□ 1.54
PDLIM2-202ENST00000308354 SNAPC2Q13487 334 aa24.68■■□□□ 1.54
PDLIM2-202ENST00000308354 GPIHBP1Q8IV16 184 aa24.68■■□□□ 1.54
PDLIM2-202ENST00000308354 K7ENM7 598 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 KCNMA1Q12791 1236 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 TSR1Q2NL82 804 aaKnown RBP24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 SMAP1Q8IYB5 467 aaPredicted RBP24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 ZNF526Q8TF50 670 aaPredicted RBP24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 PCDHB13Q9Y5F0 798 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 MYH11P35749 1972 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 NFASCO94856 1347 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 NDUFA10O95299 355 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 PSAPP07602 524 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 ARHGAP29Q52LW3 1261 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 FAM133AQ8N9E0 248 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 RDM1Q8NG50 284 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 MAF1Q9H063 256 aa24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 LARSQ9P2J5 1176 aaKnown RBP24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 EPN1Q9Y6I3 576 aaPredicted RBP24.67■■□□□ 1.54
PDLIM2-202ENST00000308354 KIF5CO60282 957 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 SOX10P56693 466 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 APBA1Q02410 837 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 FAM102BQ5T8I3 360 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 RRAGCQ9HB90 399 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 ARMCX3Q9UH62 379 aaPredicted RBP24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 REXO2Q9Y3B8 237 aaKnown RBP24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 ZBED6P86452 979 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 MEA1Q16626 185 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 ERCC6LQ2NKX8 1250 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 ABHD15Q6UXT9 468 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 ANKEF1Q9NU02 776 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 LOXHD1Q8IVV2 1947 aa24.66■■□□□ 1.54
PDLIM2-202ENST00000308354 RPL13P26373 211 aaKnown RBP24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 KCNH2Q12809 1159 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 ATP6V0A1Q93050 837 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 CEP170P1Q96L14 293 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 STBD1O95210 358 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 SLC25A27O95847 323 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 PLS3P13797 630 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 ARHGAP25P42331 645 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 DCAF17Q5H9S7 520 aaPredicted RBP24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 FIGNQ5HY92 759 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 STXBP4Q6ZWJ1 553 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 SYCP3Q8IZU3 236 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 CARD6Q9BX69 1037 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 STRA6Q9BX79 667 aa24.65■■□□□ 1.54
PDLIM2-202ENST00000308354 PPP1R37O75864 691 aa24.64■■□□□ 1.54
PDLIM2-202ENST00000308354 EDNRBP24530 442 aa24.64■■□□□ 1.54
PDLIM2-202ENST00000308354 ICAM3P32942 547 aa24.64■■□□□ 1.54
PDLIM2-202ENST00000308354 PEX3P56589 373 aa24.64■■□□□ 1.54
PDLIM2-202ENST00000308354 FRMD5Q7Z6J6 570 aa24.64■■□□□ 1.54
PDLIM2-202ENST00000308354 GBP3Q9H0R5 595 aa24.64■■□□□ 1.54
PDLIM2-202ENST00000308354 MRFAP1Q9Y605 127 aa24.64■■□□□ 1.54
PDLIM2-202ENST00000308354 TISP43B9A030 160 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 UBA1P22314 1058 aaKnown RBP24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 CYP2J2P51589 502 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 PRKCEQ02156 737 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 ZNF569Q5MCW4 686 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 TCERG1LQ5VWI1 586 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 MNS1Q8NEH6 495 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 PORCNQ9H237 461 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 AGPAT3Q9NRZ7 376 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 SEPT9Q9UHD8 586 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 A0A1W2PQJ5 194 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 SLC16A4O15374 487 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 MIS18BP1Q6P0N0 1132 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 HS2ST1Q7LGA3 356 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 ZNF397Q8NF99 534 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 FGD4Q96M96 766 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 MMP19Q99542 508 aa24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 CGNQ9P2M7 1197 aaKnown RBP24.63■■□□□ 1.53
PDLIM2-202ENST00000308354 SUPT20HL2P0C7V6 817 aa24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 EPB41P11171 864 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 ERVK-9P63128 1117 aa24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 KCTD2Q14681 263 aa24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 OTUD6AQ7L8S5 288 aa24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 NEK11Q8NG66 645 aa24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 DRC1Q96MC2 740 aa24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 KIFC3Q9BVG8 833 aa24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 EFCC1Q9HA90 598 aa24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 ZNHIT6Q9NWK9 470 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 FAM184BQ9ULE4 1060 aa24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 XRCC5P13010 732 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 RRAGAQ7L523 313 aa24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 LSM14BQ9BX40 385 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-202ENST00000308354 NLRC4Q9NPP4 1024 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms