RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SKIP12755 728 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 KIF23Q02241 960 aaPredicted RBP13.53□□□□□ -0.24
USP38-201ENST00000307017 IMPG1Q17R60 797 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 FLCNQ8NFG4 579 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 ACCSQ96QU6 501 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 MYL3P08590 195 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 ARL4AP40617 200 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 RAP1GDS1P52306 607 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 DRP2Q13474 957 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 MCTP2Q6DN12 878 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 ICA1LQ8NDH6 482 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 ERLEC1Q96DZ1 483 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 SLITRK6Q9H5Y7 841 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 NEDD4P46934 1319 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 SRGAP2BP0DMP2 458 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 GPR162Q16538 588 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 RHBDL2Q9NX52 303 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 ERBB3P21860 1342 aa13.52□□□□□ -0.24
USP38-201ENST00000307017 NCAPHQ15003 741 aa13.52□□□□□ -0.24
USP38-201ENST00000307017 CNKSR1Q969H4 720 aa13.52□□□□□ -0.24
USP38-201ENST00000307017 TMA16Q96EY4 203 aaKnown RBP13.52□□□□□ -0.24
USP38-201ENST00000307017 DFFAO00273 331 aa13.52□□□□□ -0.24
USP38-201ENST00000307017 SLC39A14Q15043 492 aa13.52□□□□□ -0.24
USP38-201ENST00000307017 TERF2Q15554 542 aa13.52□□□□□ -0.24
USP38-201ENST00000307017 MAN2A1Q16706 1144 aa13.52□□□□□ -0.24
USP38-201ENST00000307017 FBXO18Q8NFZ0 1043 aa13.52□□□□□ -0.24
USP38-201ENST00000307017 LRRC4Q9HBW1 653 aa13.52□□□□□ -0.24
USP38-201ENST00000307017 NPHS2Q9NP85 383 aa13.52□□□□□ -0.24
USP38-201ENST00000307017 MRPL42Q9Y6G3 142 aaKnown RBP13.52□□□□□ -0.24
USP38-201ENST00000307017 ATP9BO43861 1147 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 SERPIND1P05546 499 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 GPS1Q13098 491 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 KRT26Q7Z3Y9 468 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 PARP9Q8IXQ6 854 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 BTN2A2Q8WVV5 523 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 ASZ1Q8WWH4 475 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 CCDC159P0C7I6 412 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 HIF1AQ16665 826 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 ZBED8Q8IZ13 594 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 SIX6OS1Q8N1H7 587 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 AGAP3Q96P47 875 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 PRPF4O43172 522 aaKnown RBP eCLIP13.52□□□□□ -0.25
USP38-201ENST00000307017 N4BP1O75113 896 aaKnown RBP13.52□□□□□ -0.25
USP38-201ENST00000307017 LCP1P13796 627 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 PRCPP42785 496 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 STAT2P52630 851 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 PDZD4Q76G19 769 aaPredicted RBP13.52□□□□□ -0.25
USP38-201ENST00000307017 CYB5R4Q7L1T6 521 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 SCN4BQ8IWT1 228 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 LINC00301Q8NCQ3 95 aa13.52□□□□□ -0.25
USP38-201ENST00000307017 ADORA2BP29275 332 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 KLK7P49862 253 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 TADA2BQ86TJ2 420 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 INPP5DQ92835 1189 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 FAM213AQ9BRX8 229 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 MSTO1Q9BUK6 570 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 CAPN10Q9HC96 672 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 POLR2BP30876 1174 aaKnown RBP13.51□□□□□ -0.25
USP38-201ENST00000307017 LONRF1Q17RB8 773 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 NUP85Q9BW27 656 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 KLHL8Q9P2G9 620 aaPredicted RBP13.51□□□□□ -0.25
USP38-201ENST00000307017 UHRF1BP1Q6BDS2 1440 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 CPA2P48052 419 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 PCYT1AP49585 367 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 EML3Q32P44 896 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 CYGBQ8WWM9 190 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 THEGQ9P2T0 379 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 LRFN2Q9ULH4 789 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 AOX1Q06278 1338 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 GJC2Q5T442 439 aaPredicted RBP13.51□□□□□ -0.25
USP38-201ENST00000307017 MIS18BP1Q6P0N0 1132 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 SLC30A5Q8TAD4 765 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 MMTAG2Q9BU76 263 aaKnown RBP13.51□□□□□ -0.25
USP38-201ENST00000307017 HSPBP1Q9NZL4 362 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 SLC13A4Q9UKG4 626 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 TCP11X1B4DZS4 312 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 E9PMD0 336 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 PMS2P54278 862 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 PARP10Q53GL7 1025 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 MAP7D3Q8IWC1 876 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 TMCO5AQ8N6Q1 288 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 AFG1LQ8WV93 481 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 NDST4Q9H3R1 872 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 UNC45AQ9H3U1 944 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 CASS4Q9NQ75 786 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 MAP10Q9P2G4 905 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 RWDD2AQ9UIY3 292 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 SLC16A4O15374 487 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 ACCSLQ4AC99 568 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 LONP2Q86WA8 852 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 SH3RF3Q8TEJ3 882 aaPredicted RBP13.51□□□□□ -0.25
USP38-201ENST00000307017 ACSF2Q96CM8 615 aaPredicted RBP13.51□□□□□ -0.25
USP38-201ENST00000307017 FSD1LQ9BXM9 530 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 PIH1D3Q9NQM4 214 aaKnown RBP13.51□□□□□ -0.25
USP38-201ENST00000307017 ABHD10Q9NUJ1 306 aa13.51□□□□□ -0.25
USP38-201ENST00000307017 NOP53Q9NZM5 478 aaKnown RBP13.51□□□□□ -0.25
USP38-201ENST00000307017 DNAJC12Q9UKB3 198 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms