RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 EIF3BP55884 814 aaKnown RBP11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 COL23A1Q86Y22 540 aaPredicted RBP11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 GLG1Q92896 1179 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 STK33Q9BYT3 514 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 EPC1Q9H2F5 836 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 AGTPBP1Q9UPW5 1226 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 SYNGAP1Q96PV0 1343 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 MYO1FO00160 1098 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 CHRNA5P30532 468 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 PEX3P56589 373 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 NNTQ13423 1086 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 MESDQ14696 234 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 WDR93Q6P2C0 686 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 MMGT1Q8N4V1 131 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 C4orf32Q8N8J7 132 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 NSUN6Q8TEA1 469 aaKnown RBP11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 MKL1Q969V6 931 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 PHLPP1O60346 1717 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 LRRIQ4A6NIV6 560 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 RGS16O15492 202 aaPredicted RBP11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 LDHAP00338 332 aaKnown RBP11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 LMNB2Q03252 620 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 DRAP1Q14919 205 aaPredicted RBP11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 RFFLQ8WZ73 363 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 PNMA5Q96PV4 448 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 DUSP9Q99956 384 aaKnown RBP11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 DPH5Q9H2P9 285 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 SLITRK6Q9H5Y7 841 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 HOMER3Q9NSC5 361 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 RGL1Q9NZL6 768 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 INTUQ9ULD6 942 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
PCDHGC4-201ENST00000306593 ROBO1Q9Y6N7 1651 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 HMGB1P1B2RPK0 211 aaPredicted RBP11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 MSH4O15457 936 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 TNNC2P02585 160 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 INPP5BP32019 993 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 DDR1Q08345 913 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 NAB2Q15742 525 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 MEA1Q16626 185 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 C10orf67Q8IYJ2 551 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 KIAA0895Q8NCT3 520 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 AGBL3Q8NEM8 1001 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 MAGOHBQ96A72 148 aaKnown RBP11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 ZNF233A6NK53 670 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 THAP12O43422 761 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 HIP1RO75146 1068 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 NPM3O75607 178 aaKnown RBP11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 TFDP1Q14186 410 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 XRRA1Q6P2D8 792 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 MAK16Q9BXY0 300 aaKnown RBP11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 MIS12Q9H081 205 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 MRPL47Q9HD33 250 aaKnown RBP11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 RAB20Q9NX57 234 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 P4HA2O15460 535 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 KLK7P49862 253 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 PMS1P54277 932 aaKnown RBP11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 SURF1Q15526 300 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 IL17AQ16552 155 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 ENOSF1Q7L5Y1 443 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 BCAS4Q8TDM0 211 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 ATP6V0A4Q9HBG4 840 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 FBXO40Q9UH90 709 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 LCMT1Q9UIC8 334 aa11.78□□□□□ -0.52
PCDHGC4-201ENST00000306593 KLRC4O43908 158 aa11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 GPC5P78333 572 aa11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 SLC7A5Q01650 507 aa11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 APOBEC3HQ6NTF7 200 aaKnown RBP11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 ZFP91Q96JP5 570 aaPredicted RBP11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 MXRA8Q9BRK3 442 aa11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 RAVER2Q9HCJ3 691 aaKnown RBP11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 ZNF277Q9NRM2 450 aaPredicted RBP11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 BLOC1S4Q9NUP1 217 aa11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 HOXC10Q9NYD6 342 aa11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 TRIM10Q9UDY6 481 aa11.77□□□□□ -0.52
PCDHGC4-201ENST00000306593 PODXLO00592 558 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 PBX1P40424 430 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 ZNF662Q6ZS27 426 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 PLEKHA4Q9H4M7 779 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 KCNK9Q9NPC2 374 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 DDX4Q9NQI0 724 aaKnown RBP11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 CALRP27797 417 aaKnown RBP11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 MAPK4P31152 587 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 DR1Q01658 176 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 NFU1Q9UMS0 254 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 TMX2Q9Y320 296 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 AHDC1Q5TGY3 1603 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 SLIT2O94813 1529 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 E7EVH7 732 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 KIAA0391O15091 583 aaKnown RBP11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 SART1O43290 800 aaKnown RBP11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 MED24O75448 989 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 NMT1P30419 496 aaKnown RBP11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 FMO5P49326 533 aa11.77□□□□□ -0.53
PCDHGC4-201ENST00000306593 HERVK_113P62684 666 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms