RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZRSR2Q15696 482 aaKnown RBP10.06□□□□□ -0.8
PTPRE-202ENST00000306042 IL17RBQ9NRM6 502 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 COX16Q9P0S2 106 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 DNAI1Q9UI46 699 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 MED7O43513 233 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 TRAPPC3O43617 180 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 MAN2A1Q16706 1144 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 GLB1LQ6UWU2 654 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 AFG1LQ8WV93 481 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 MAN1B1Q9UKM7 699 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 COL16A1Q07092 1604 aaPredicted RBP10.05□□□□□ -0.8
PTPRE-202ENST00000306042 CICQ96RK0 1608 aaPredicted RBP10.05□□□□□ -0.8
PTPRE-202ENST00000306042 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 OATP04181 439 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 ABCB4P21439 1286 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 COASYQ13057 564 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 BIRC2Q13490 618 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 SIX6OS1Q8N1H7 587 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 LRRC71Q8N4P6 559 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 MTMR14Q8NCE2 650 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 HEXIM2Q96MH2 286 aaKnown RBP10.05□□□□□ -0.8
PTPRE-202ENST00000306042 ACAP3Q96P50 834 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 FSD2A1L4K1 749 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 SLC15A5A6NIM6 579 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 STK25O00506 426 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 TGFB3P10600 412 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 CYP2C19P33261 490 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 CUL4BQ13620 913 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 ZNF569Q5MCW4 686 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 SPRYD7Q5W111 196 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.05□□□□□ -0.8
PTPRE-202ENST00000306042 RIOX2Q8IUF8 465 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 OR8K1Q8NGG5 319 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 RIOX1Q9H6W3 641 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 FAM204AQ9H8W3 233 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 TSKSQ9UJT2 592 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 TTLL3Q9Y4R7 772 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 E7EVH7 732 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 RNF8O76064 485 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 PLA2G4FQ68DD2 849 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 PQBP1O60828 265 aaKnown RBP10.05□□□□□ -0.8
PTPRE-202ENST00000306042 COPB1P53618 953 aaKnown RBP10.05□□□□□ -0.8
PTPRE-202ENST00000306042 ACVR2BQ13705 512 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 HADHQ16836 314 aaKnown RBP10.05□□□□□ -0.8
PTPRE-202ENST00000306042 PCNX4Q63HM2 1172 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 RUFY4Q6ZNE9 571 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 TRIM50Q86XT4 487 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 TNS4Q8IZW8 715 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 KIF12Q96FN5 646 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 NAP1L3Q99457 506 aaPredicted RBP10.05□□□□□ -0.8
PTPRE-202ENST00000306042 GCNT4Q9P109 453 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 SLC12A6Q9UHW9 1150 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 TUBE1Q9UJT0 475 aa10.05□□□□□ -0.8
PTPRE-202ENST00000306042 STAG3L1P0CL83 205 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 U2AF2P26368 475 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 PPP1R7Q15435 360 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 TLK2Q86UE8 772 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 SHCBP1Q8NEM2 672 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 RNF139Q8WU17 664 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 MTG1Q9BT17 334 aaPredicted RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 XPO4Q9C0E2 1151 aaKnown RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 USP2O75604 605 aaPredicted RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 ALDH5A1P51649 535 aaPredicted RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 NLRP11P59045 1033 aaKnown RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 METTL7BQ6UX53 244 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 SCN4BQ8IWT1 228 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 RWDD2AQ9UIY3 292 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 AGO2Q9UKV8 859 aaKnown RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 ODF2LQ9ULJ1 636 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 KLRG2A4D1S0 409 aaPredicted RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 LRRN2O75325 713 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 CPB1P15086 417 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 CAPN2P17655 700 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 SREBF1P36956 1147 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 CNTN2Q02246 1040 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 ZNF699Q32M78 642 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 ZNF484Q5JVG2 852 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 ANKRD23Q86SG2 305 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 A1CFQ9NQ94 594 aaKnown RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 SALL3Q9BXA9 1300 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 DPYSL4O14531 572 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 NR3C1P04150 777 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 MYZAPP0CAP1 466 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 ZNF75DP51815 510 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 MAP2K5Q13163 448 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 KRT81Q14533 505 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 CCDC14Q49A88 953 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 BBXQ8WY36 941 aaPredicted RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 MKL1Q969V6 931 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 TINF2Q9BSI4 451 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 SLC38A10Q9HBR0 1119 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 UBE2TQ9NPD8 197 aaPredicted RBP10.04□□□□□ -0.8
PTPRE-202ENST00000306042 HPS5Q9UPZ3 1129 aa10.04□□□□□ -0.8
PTPRE-202ENST00000306042 SHPRHQ149N8 1683 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 ASTN2O75129 1339 aaPredicted RBP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 CTAGE15A4D2H0 777 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 H3BRB1 525 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 MSH4O15457 936 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 CTAGE8P0CG41 777 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms