RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 POLD4Q9HCU8 107 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 NGRNQ9NPE2 291 aaKnown RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 THEGQ9P2T0 379 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 TTI1O43156 1089 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 XXYLT1Q8NBI6 393 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 HECW2Q9P2P5 1572 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 LAMC1P11047 1609 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 USP17L10C9JJH3 530 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 STMN1P16949 149 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 ZSCAN20P17040 1043 aaPredicted RBP14.94□□□□□ -0.02
PRKCB-201ENST00000303531 ART3Q13508 389 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 THNSL1Q8IYQ7 743 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 CEP95Q96GE4 821 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 EFHD1Q9BUP0 239 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 KIF28PB7ZC32 967 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 GRM4Q14833 912 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 PADI6Q6TGC4 694 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 PASD1Q8IV76 773 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 OSBPL9Q96SU4 736 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 ADGRG1Q9Y653 693 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 PP2D1A8MPX8 630 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 CFLARO15519 480 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 ARMCX2Q7L311 632 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 CRKP46108 304 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 SHC4Q6S5L8 630 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 MRPL46Q9H2W6 279 aaKnown RBP14.94□□□□□ -0.02
PRKCB-201ENST00000303531 TRPA1O75762 1119 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 ZNF667Q5HYK9 610 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 HDAC6Q9UBN7 1215 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 ADGRL3Q9HAR2 1447 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 ANKRD65E5RJM6 399 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 RPAINQ86UA6 219 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 ATP6V0A4Q9HBG4 840 aa14.94□□□□□ -0.02
PRKCB-201ENST00000303531 TTC26A0AVF1 554 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 FOXN1O15353 648 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 ZRANB2O95218 330 aaKnown RBP eCLIP14.93□□□□□ -0.02
PRKCB-201ENST00000303531 XPAP23025 273 aaPredicted RBP14.93□□□□□ -0.02
PRKCB-201ENST00000303531 SPARCL1Q14515 664 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 PPP6R3Q5H9R7 873 aaPredicted RBP14.93□□□□□ -0.02
PRKCB-201ENST00000303531 ADCY10Q96PN6 1610 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 ARPP19P56211 112 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 PHEXP78562 749 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 TTC17Q96AE7 1141 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 DYDC2Q96IM9 177 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 RBM41Q96IZ5 413 aaKnown RBP14.93□□□□□ -0.02
PRKCB-201ENST00000303531 TET3O43151 1660 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 UTYO14607 1347 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 CPDO75976 1380 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 KNOP1Q1ED39 458 aaKnown RBP14.93□□□□□ -0.02
PRKCB-201ENST00000303531 RSBN1LQ6PCB5 846 aaPredicted RBP14.93□□□□□ -0.02
PRKCB-201ENST00000303531 SCOCQ9UIL1 159 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 ANGPTL2Q9UKU9 493 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 A0A0G2JND7 137 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 ASNSP08243 561 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 SKIP12755 728 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 ARL4CP56559 192 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 OR6B3Q8NGW1 331 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 BARHL2Q9NY43 387 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 MID2Q9UJV3 735 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 CDHR2Q9BYE9 1310 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 MAP3K4Q9Y6R4 1608 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 RASA4BC9J798 803 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 RASA4O43374 803 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 KLC2Q9H0B6 622 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 PPME1Q9Y570 386 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 ABCB11O95342 1321 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 TRPM1Q7Z4N2 1603 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 ALX1Q15699 326 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 PPP1R18Q6NYC8 613 aa14.93□□□□□ -0.02
PRKCB-201ENST00000303531 DACT3Q96B18 629 aaPredicted RBP14.93□□□□□ -0.02
PRKCB-201ENST00000303531 ALDH8A1Q9H2A2 487 aaPredicted RBP14.93□□□□□ -0.02
PRKCB-201ENST00000303531 ESYT3A0FGR9 886 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 KRT37O76014 449 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 NAA30Q147X3 362 aaPredicted RBP14.92□□□□□ -0.02
PRKCB-201ENST00000303531 MTA3Q9BTC8 594 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 POTEFA5A3E0 1075 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 GSG1L2A8MUP6 293 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 POTEIP0CG38 1075 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 POTEGQ6S5H5 508 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 POTEEQ6S8J3 1075 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 CHMP6Q96FZ7 201 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 PDLIM2Q96JY6 352 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 NCAPGQ9BPX3 1015 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 EPC1Q9H2F5 836 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 KIF9Q9HAQ2 790 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 ATP8B3O60423 1300 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 FAM196BA6NMK8 535 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 SLC16A4O15374 487 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 ZNF211Q13398 564 aaPredicted RBP14.92□□□□□ -0.02
PRKCB-201ENST00000303531 ARL13BQ3SXY8 428 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 RMDN3Q96TC7 470 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 GSTA4O15217 222 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 TMEM270Q6UE05 265 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 FAM20AQ96MK3 541 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 TRAIPQ9BWF2 469 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 UBN1Q9NPG3 1134 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 CLDN3O15551 220 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 DCTN3O75935 186 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 RFX1P22670 979 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 MAGOHP61326 146 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms