RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 HIPK3Q9H422 1215 aa27.26■■□□□ 1.95
HOXC9-201ENST00000303450 BMP2KQ9NSY1 1161 aaPredicted RBP27.26■■□□□ 1.95
HOXC9-201ENST00000303450 NR2E3Q9Y5X4 410 aa27.26■■□□□ 1.95
HOXC9-201ENST00000303450 A0A1W2PQ27 194 aa27.25■■□□□ 1.95
HOXC9-201ENST00000303450 A0A1W2PQ64 194 aa27.25■■□□□ 1.95
HOXC9-201ENST00000303450 A0A1W2PQD8 194 aa27.25■■□□□ 1.95
HOXC9-201ENST00000303450 USO1O60763 962 aaKnown RBP27.25■■□□□ 1.95
HOXC9-201ENST00000303450 THPOP40225 353 aa27.25■■□□□ 1.95
HOXC9-201ENST00000303450 STAT6P42226 847 aa27.25■■□□□ 1.95
HOXC9-201ENST00000303450 PADI6Q6TGC4 694 aa27.25■■□□□ 1.95
HOXC9-201ENST00000303450 DNAJB3Q8WWF6 145 aa27.25■■□□□ 1.95
HOXC9-201ENST00000303450 NOC4LQ9BVI4 516 aaKnown RBP27.25■■□□□ 1.95
HOXC9-201ENST00000303450 ATP6V0A4Q9HBG4 840 aa27.25■■□□□ 1.95
HOXC9-201ENST00000303450 IGKV6-21A0A0C4DH24 114 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 TRIM43BA6NCK2 446 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 KIAA0355O15063 1070 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 RPLP2P05387 115 aaKnown RBP27.24■■□□□ 1.95
HOXC9-201ENST00000303450 PLA2G4BP0C869 781 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 DNM2P50570 870 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 CLCN3P51790 818 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 EMC2Q15006 297 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 RAD54LQ92698 747 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 TRIM43Q96BQ3 446 aaPredicted RBP27.24■■□□□ 1.95
HOXC9-201ENST00000303450 MTRQ99707 1265 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 PPP1R12CQ9BZL4 782 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 BLOC1S4Q9NUP1 217 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 STK17AQ9UEE5 414 aa27.24■■□□□ 1.95
HOXC9-201ENST00000303450 A0A087X0B3 334 aa27.23■■□□□ 1.95
HOXC9-201ENST00000303450 A0A1B0GVL5 298 aa27.23■■□□□ 1.95
HOXC9-201ENST00000303450 GAS2O43903 313 aaKnown RBP27.23■■□□□ 1.95
HOXC9-201ENST00000303450 TRIM71Q2Q1W2 868 aaKnown RBP27.23■■□□□ 1.95
HOXC9-201ENST00000303450 KIAA0319LQ8IZA0 1049 aa27.23■■□□□ 1.95
HOXC9-201ENST00000303450 LRRC15Q8TF66 581 aa27.23■■□□□ 1.95
HOXC9-201ENST00000303450 LARP4BQ92615 738 aaKnown RBP27.23■■□□□ 1.95
HOXC9-201ENST00000303450 MAP7D2Q96T17 732 aa27.23■■□□□ 1.95
HOXC9-201ENST00000303450 KCNH3Q9ULD8 1083 aa27.23■■□□□ 1.95
HOXC9-201ENST00000303450 PITPNM1O00562 1244 aa27.22■■□□□ 1.95
HOXC9-201ENST00000303450 RAG1P15918 1043 aa27.22■■□□□ 1.95
HOXC9-201ENST00000303450 CLEC17AQ6ZS10 378 aa27.22■■□□□ 1.95
HOXC9-201ENST00000303450 RPAINQ86UA6 219 aa27.22■■□□□ 1.95
HOXC9-201ENST00000303450 NME8Q8N427 588 aa27.22■■□□□ 1.95
HOXC9-201ENST00000303450 LINC01465Q8N7H1 131 aa27.22■■□□□ 1.95
HOXC9-201ENST00000303450 SYT2Q8N9I0 419 aaPredicted RBP27.22■■□□□ 1.95
HOXC9-201ENST00000303450 GBP4Q96PP9 640 aa27.22■■□□□ 1.95
HOXC9-201ENST00000303450 AKT3Q9Y243 479 aa27.22■■□□□ 1.95
HOXC9-201ENST00000303450 POLR2DO15514 142 aaKnown RBP27.21■■□□□ 1.95
HOXC9-201ENST00000303450 CAND2O75155 1236 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 CKBP12277 381 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 PFKFB1P16118 471 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 MLLT1Q03111 559 aaPredicted RBP27.21■■□□□ 1.95
HOXC9-201ENST00000303450 DHX8Q14562 1220 aaKnown RBP27.21■■□□□ 1.95
HOXC9-201ENST00000303450 MCM6Q14566 821 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 FSIP1Q8NA03 581 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 IQUBQ8NA54 791 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 MCPH1Q8NEM0 835 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 MRPS27Q92552 414 aaKnown RBP27.21■■□□□ 1.95
HOXC9-201ENST00000303450 PYM1Q9BRP8 204 aaKnown RBP27.21■■□□□ 1.95
HOXC9-201ENST00000303450 ZMYND8Q9ULU4 1186 aaPredicted RBP27.21■■□□□ 1.95
HOXC9-201ENST00000303450 TIMP1P01033 207 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 SYN1P17600 705 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 CYP11B2P19099 503 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 SLC12A3P55017 1021 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 RBL2Q08999 1139 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 NAALADL2Q58DX5 795 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 TMEM87AQ8NBN3 555 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 TCP11Q8WWU5 503 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 TMEM143Q96AN5 459 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 DHX58Q96C10 678 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 XPNPEP1Q9NQW7 623 aa27.21■■□□□ 1.95
HOXC9-201ENST00000303450 SUCLA2Q9P2R7 463 aaPredicted RBP27.21■■□□□ 1.95
HOXC9-201ENST00000303450 CYP2C18P33260 490 aa27.2■■□□□ 1.94
HOXC9-201ENST00000303450 TMEM62Q0P6H9 643 aa27.2■■□□□ 1.94
HOXC9-201ENST00000303450 MKRN4PQ13434 485 aaPredicted RBP27.2■■□□□ 1.94
HOXC9-201ENST00000303450 DRP2Q13474 957 aa27.2■■□□□ 1.94
HOXC9-201ENST00000303450 ZNF618Q5T7W0 954 aa27.2■■□□□ 1.94
HOXC9-201ENST00000303450 IER5Q5VY09 327 aa27.2■■□□□ 1.94
HOXC9-201ENST00000303450 RINT1Q6NUQ1 792 aa27.2■■□□□ 1.94
HOXC9-201ENST00000303450 MAEAQ7L5Y9 396 aa27.2■■□□□ 1.94
HOXC9-201ENST00000303450 UMODL1Q5DID0 1318 aa27.19■■□□□ 1.94
HOXC9-201ENST00000303450 M0QZ92 97 aa27.19■■□□□ 1.94
HOXC9-201ENST00000303450 VTNP04004 478 aa27.19■■□□□ 1.94
HOXC9-201ENST00000303450 CTSHP09668 335 aa27.19■■□□□ 1.94
HOXC9-201ENST00000303450 SELPP16109 830 aa27.19■■□□□ 1.94
HOXC9-201ENST00000303450 E2F4Q16254 413 aa27.19■■□□□ 1.94
HOXC9-201ENST00000303450 SV2BQ7L1I2 683 aa27.19■■□□□ 1.94
HOXC9-201ENST00000303450 RUSC1Q9BVN2 902 aa27.19■■□□□ 1.94
HOXC9-201ENST00000303450 CUEDC2Q9H467 287 aa27.19■■□□□ 1.94
HOXC9-201ENST00000303450 HPSEQ9Y251 543 aa27.19■■□□□ 1.94
HOXC9-201ENST00000303450 NDUFA8P51970 172 aa27.18■■□□□ 1.94
HOXC9-201ENST00000303450 CCL23P55773 120 aa27.18■■□□□ 1.94
HOXC9-201ENST00000303450 MRPS6P82932 125 aaKnown RBP27.18■■□□□ 1.94
HOXC9-201ENST00000303450 FAM102BQ5T8I3 360 aa27.18■■□□□ 1.94
HOXC9-201ENST00000303450 C1orf186Q6ZWK4 172 aa27.18■■□□□ 1.94
HOXC9-201ENST00000303450 LRRC8DQ7L1W4 858 aa27.18■■□□□ 1.94
HOXC9-201ENST00000303450 GPBP1Q86WP2 473 aa27.18■■□□□ 1.94
HOXC9-201ENST00000303450 PSPC1Q8WXF1 523 aaKnown RBP27.18■■□□□ 1.94
HOXC9-201ENST00000303450 KCND2Q9NZV8 630 aa27.18■■□□□ 1.94
HOXC9-201ENST00000303450 FAM237AA0A1B0GTK4 181 aa27.17■■□□□ 1.94
HOXC9-201ENST00000303450 RSPH10B2B2RC85 870 aa27.17■■□□□ 1.94
HOXC9-201ENST00000303450 RSPH10BP0C881 870 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms