RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SLC35C1Q96A29 364 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 CARD6Q9BX69 1037 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 AGPAT3Q9NRZ7 376 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 AIPL1Q9NZN9 384 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 PCDHA10Q9Y5I2 948 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 RBAK-RBAKDNI3L0D1 243 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 SERPING1P05155 500 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 KIF11P52732 1056 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 PPATQ06203 517 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 KCNA1Q09470 495 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 PPP2R5AQ15172 486 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 ASTE1Q2TB18 679 aaPredicted RBP21.3■■□□□ 1
HOXC4-201ENST00000303406 SLC9C1Q4G0N8 1177 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 ZC2HC1CQ53FD0 456 aaPredicted RBP21.3■■□□□ 1
HOXC4-201ENST00000303406 CCDC122Q5T0U0 273 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 HGSNATQ68CP4 663 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 DPY19L2P1Q6NXN4 242 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 FAM186BQ8IYM0 893 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 CCDC43Q96MW1 224 aaKnown RBP21.3■■□□□ 1
HOXC4-201ENST00000303406 PFASO15067 1338 aa21.3■■□□□ 1
HOXC4-201ENST00000303406 USO1O60763 962 aaKnown RBP21.29■■□□□ 1
HOXC4-201ENST00000303406 ICAM3P32942 547 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 EIF4A3P38919 411 aaKnown RBP21.29■■□□□ 1
HOXC4-201ENST00000303406 HSP90AA2PQ14568 343 aaPredicted RBP21.29■■□□□ 1
HOXC4-201ENST00000303406 GBP6Q6ZN66 633 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 RIOX2Q8IUF8 465 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 CEP112Q8N8E3 955 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 ZC3H15Q8WU90 426 aaKnown RBP21.29■■□□□ 1
HOXC4-201ENST00000303406 ATP6V0A1Q93050 837 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 HVCN1Q96D96 273 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 L3MBTL3Q96JM7 780 aaPredicted RBP21.29■■□□□ 1
HOXC4-201ENST00000303406 LCTP09848 1927 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 SPATA31C2B4DYI2 1134 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 CXCL11O14625 94 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 CLIC2O15247 247 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 PJA2O43164 708 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 CASP4P49662 377 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 POLR2FP61218 127 aaKnown RBP21.29■■□□□ 1
HOXC4-201ENST00000303406 KIF5AQ12840 1032 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 NAA30Q147X3 362 aaPredicted RBP21.29■■□□□ 1
HOXC4-201ENST00000303406 ELF2Q15723 593 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 UGCGQ16739 394 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 EXOC3L4Q17RC7 722 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 USP50Q70EL3 339 aaPredicted RBP21.29■■□□□ 1
HOXC4-201ENST00000303406 OTUD6AQ7L8S5 288 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 UBXN4Q92575 508 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 ACCSQ96QU6 501 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 DEF6Q9H4E7 631 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 GUCA1BQ9UMX6 200 aa21.29■■□□□ 1
HOXC4-201ENST00000303406 A0A0G2JLL6 359 aaPredicted RBP21.28■■□□□ 1
HOXC4-201ENST00000303406 K7ENM7 598 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 IRF6O14896 467 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 ZNF263O14978 683 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 MAPK13O15264 365 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 RGS20O76081 388 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 ABL1P00519 1130 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 PSAPP07602 524 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 ERCC3P19447 782 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 ANXA13P27216 316 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 NCKAP1LP55160 1127 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 GTF2BQ00403 316 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 WHAMMP3Q1A5X7 153 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.28■■□□□ 1
HOXC4-201ENST00000303406 PRRT2Q7Z6L0 340 aaPredicted RBP21.28■■□□□ 1
HOXC4-201ENST00000303406 C17orf75Q9HAS0 396 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 POLD4Q9HCU8 107 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 FRMD4BQ9Y2L6 1034 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 PCDHA13Q9Y5I0 950 aa21.28■■□□□ 1
HOXC4-201ENST00000303406 ANO9A1A5B4 782 aa21.27■■□□□ 1
HOXC4-201ENST00000303406 ADM5C9JUS6 153 aa21.27■■□□□ 1
HOXC4-201ENST00000303406 BACH1O14867 736 aa21.27■■□□□ 1
HOXC4-201ENST00000303406 AKR1B10O60218 316 aa21.27■■□□□ 1
HOXC4-201ENST00000303406 PON1P27169 355 aa21.27■■□□□ 1
HOXC4-201ENST00000303406 MCCD1P59942 119 aaPredicted RBP21.27■■□□□ 1
HOXC4-201ENST00000303406 PRKG1Q13976 671 aa21.27■■□□□ 1
HOXC4-201ENST00000303406 KLHDC7AQ5VTJ3 777 aa21.27■■□□□ 1
HOXC4-201ENST00000303406 RSRC2Q7L4I2 434 aaKnown RBP21.27■■□□□ 1
HOXC4-201ENST00000303406 ERO1BQ86YB8 467 aa21.27■■□□□ 1
HOXC4-201ENST00000303406 NLRC4Q9NPP4 1024 aa21.27■■□□□ 1
HOXC4-201ENST00000303406 LUC7LQ9NQ29 371 aaKnown RBP21.27■■□□□ 1
HOXC4-201ENST00000303406 BZW2Q9Y6E2 419 aaKnown RBP21.27■■□□□ 1
HOXC4-201ENST00000303406 KIAA1217Q5T5P2 1943 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 EIF3JO75822 258 aaKnown RBP21.26■□□□□ 0.99
HOXC4-201ENST00000303406 PLEKP08567 350 aaPredicted RBP21.26■□□□□ 0.99
HOXC4-201ENST00000303406 NF2P35240 595 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 AMPD2Q01433 879 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 PLS1Q14651 629 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 ERCC6LQ2NKX8 1250 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 DCAF17Q5H9S7 520 aaPredicted RBP21.26■□□□□ 0.99
HOXC4-201ENST00000303406 SRGAP1Q7Z6B7 1085 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 ANKRD13AQ8IZ07 590 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 SYCP3Q8IZU3 236 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 LRRN4CLQ8ND94 238 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 CRACR2AQ9BSW2 395 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 IFIH1Q9BYX4 1025 aaKnown RBP21.26■□□□□ 0.99
HOXC4-201ENST00000303406 JPH1Q9HDC5 661 aaPredicted RBP21.26■□□□□ 0.99
HOXC4-201ENST00000303406 WDR81Q562E7 1941 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 ATP8B3O60423 1300 aa21.26■□□□□ 0.99
HOXC4-201ENST00000303406 SPDYE5A6NIY4 337 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 TLR2O60603 784 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms