RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 IGSF9BQ9UPX0 1349 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 DNAJC25-GNG10A0A024R161 153 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 SOWAHBA6NEL2 793 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 BACH1O14867 736 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 ZNF862O60290 1169 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 USO1O60763 962 aaKnown RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 DGAT1O75907 488 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 AKAP3O75969 853 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 STBD1O95210 358 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 SUPT20HL2P0C7V6 817 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 XRCC5P13010 732 aaKnown RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 ABCD1P33897 745 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 PSMC2P35998 433 aaKnown RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 NCKAP1LP55160 1127 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 GTF2BQ00403 316 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 KCNA1Q09470 495 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 KCNMA1Q12791 1236 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 KCNH2Q12809 1159 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 NEDD9Q14511 834 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 MTF1Q14872 753 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 ZC2HC1CQ53FD0 456 aaPredicted RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 XKR3Q5GH77 459 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 TRIM65Q6PJ69 517 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 WDR59Q6PJI9 974 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 C12orf56Q8IXR9 622 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 MCPH1Q8NEM0 835 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 NEK11Q8NG66 645 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 KIFAP3Q92845 792 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 KCNN1Q92952 543 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 BORCS6Q96GS4 357 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 BCAS3Q9H6U6 928 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 TXNRD2Q9NNW7 524 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 EPN1Q9Y6I3 576 aaPredicted RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 WDR81Q562E7 1941 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 IGKV6D-21A0A0A0MT36 114 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 GTPBP10A4D1E9 387 aaKnown RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 K7ENM7 598 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 CETPP11597 493 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 SCP2P22307 547 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 KLK7P49862 253 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 SMTNP53814 917 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 KCTD2Q14681 263 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 PPP2R5AQ15172 486 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 UTP14CQ5TAP6 766 aaKnown RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 SWSAP1Q6NVH7 229 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 ZNF662Q6ZS27 426 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 CCDC60Q8IWA6 550 aaPredicted RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 MORC4Q8TE76 937 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 SPIRE2Q8WWL2 714 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 SYN2Q92777 582 aaPredicted RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 ACCSQ96QU6 501 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 NTPCRQ9BSD7 190 aaKnown RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 MMRN2Q9H8L6 949 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 POLD4Q9HCU8 107 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 PLCB1Q9NQ66 1216 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 PDLIM7Q9NR12 457 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 AGPAT3Q9NRZ7 376 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 CEP72Q9P209 647 aa11.64□□□□□ -0.55
CLP1-201ENST00000302731 MAFBQ9Y5Q3 323 aaPredicted RBP11.64□□□□□ -0.55
CLP1-201ENST00000302731 UQCRHLA0A096LP55 91 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 DYNC1I1O14576 645 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 RIOK3O14730 519 aaKnown RBP11.63□□□□□ -0.55
CLP1-201ENST00000302731 MAPK13O15264 365 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 NDUFA10O95299 355 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 AFPP02771 609 aaKnown RBP11.63□□□□□ -0.55
CLP1-201ENST00000302731 UQCRHP07919 91 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 CYLC1P35663 651 aaPredicted RBP11.63□□□□□ -0.55
CLP1-201ENST00000302731 GTF2A2P52657 109 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 ERVK-9P63128 1117 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 CCNA1P78396 465 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 SP2Q02086 613 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 Q3C1V9 767 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 HAUS6Q7Z4H7 955 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 BAP1Q92560 729 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 CEP170P1Q96L14 293 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 MMP19Q99542 508 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 CHP1Q99653 195 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 DESI2Q9BSY9 194 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 FAM207AQ9NSI2 230 aaPredicted RBP11.63□□□□□ -0.55
CLP1-201ENST00000302731 FBXL5Q9UKA1 691 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 FRMD4BQ9Y2L6 1034 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 PPME1Q9Y570 386 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 LRRC37A2A6NM11 1700 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 SYNGAP1Q96PV0 1343 aa11.63□□□□□ -0.55
CLP1-201ENST00000302731 H0YCG3 227 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 CLIC2O15247 247 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 PEX10O60683 326 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 FARP2O94887 1054 aaPredicted RBP11.62□□□□□ -0.55
CLP1-201ENST00000302731 UBA1P22314 1058 aaKnown RBP11.62□□□□□ -0.55
CLP1-201ENST00000302731 NPEPPSP55786 919 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 MCCD1P59942 119 aaPredicted RBP11.62□□□□□ -0.55
CLP1-201ENST00000302731 KRT83P78385 493 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 PRKCEQ02156 737 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 DMP1Q13316 513 aaPredicted RBP11.62□□□□□ -0.55
CLP1-201ENST00000302731 MAP1SQ66K74 1059 aaPredicted RBP11.62□□□□□ -0.55
CLP1-201ENST00000302731 PLA2G4FQ68DD2 849 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 SYT10Q6XYQ8 523 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 SEPT14Q6ZU15 432 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 CYFIP1Q7L576 1253 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms