RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 FGFR1OPO95684 399 aaKnown RBP14.34□□□□□ -0.11
CCDC7-202ENST00000302316 PLS3P13797 630 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 CYP2B6P20813 491 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 EEF1GP26641 437 aaKnown RBP14.34□□□□□ -0.11
CCDC7-202ENST00000302316 LAMC2Q13753 1193 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 FILIP1LQ4L180 1135 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 TRIM50Q86XT4 487 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 USP6NLQ92738 828 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 FIZ1Q96SL8 496 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 APBA2Q99767 749 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 ATP6V0A4Q9HBG4 840 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 INTS13Q9NVM9 706 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 UBE4BO95155 1302 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 EMSYQ7Z589 1322 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 MYH11P35749 1972 aa14.34□□□□□ -0.11
CCDC7-202ENST00000302316 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.33□□□□□ -0.11
CCDC7-202ENST00000302316 K7ENM7 598 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 LGR5O75473 907 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 KNOP1Q1ED39 458 aaKnown RBP14.33□□□□□ -0.11
CCDC7-202ENST00000302316 HS1BP3Q53T59 392 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 TMC6Q7Z403 805 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 MCPH1Q8NEM0 835 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 ZNF507Q8TCN5 953 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 FAM167AQ96KS9 214 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 CNOT6LQ96LI5 555 aaKnown RBP14.33□□□□□ -0.11
CCDC7-202ENST00000302316 NRBP2Q9NSY0 501 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 TAB2Q9NYJ8 693 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 FLRT1Q9NZU1 646 aa14.33□□□□□ -0.11
CCDC7-202ENST00000302316 MARK3P27448 753 aa14.33□□□□□ -0.12
CCDC7-202ENST00000302316 POLGP54098 1239 aaPredicted RBP14.33□□□□□ -0.12
CCDC7-202ENST00000302316 ZC2HC1CQ53FD0 456 aaPredicted RBP14.33□□□□□ -0.12
CCDC7-202ENST00000302316 ZNF720Q7Z2F6 126 aa14.33□□□□□ -0.12
CCDC7-202ENST00000302316 FILIP1Q7Z7B0 1213 aa14.33□□□□□ -0.12
CCDC7-202ENST00000302316 REM2Q8IYK8 340 aaPredicted RBP14.33□□□□□ -0.12
CCDC7-202ENST00000302316 KIFAP3Q92845 792 aa14.33□□□□□ -0.12
CCDC7-202ENST00000302316 NRBP1Q9UHY1 535 aa14.33□□□□□ -0.12
CCDC7-202ENST00000302316 DOCK3Q8IZD9 2030 aa14.33□□□□□ -0.12
CCDC7-202ENST00000302316 SMPD1P17405 629 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 CTGFP29279 349 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 HOXD13P35453 343 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 COPB1P53618 953 aaKnown RBP14.32□□□□□ -0.12
CCDC7-202ENST00000302316 FCGRTP55899 365 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 FKBP3Q00688 224 aaKnown RBP14.32□□□□□ -0.12
CCDC7-202ENST00000302316 EMC2Q15006 297 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 CCL14Q16627 93 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 CCDC144BQ3MJ40 725 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 DUSP28Q4G0W2 176 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 LRRC55Q6ZSA7 311 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 PLPPR4Q7Z2D5 763 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
CCDC7-202ENST00000302316 NIFKQ9BYG3 293 aaKnown RBP14.32□□□□□ -0.12
CCDC7-202ENST00000302316 VPS16Q9H269 839 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 XPNPEP1Q9NQW7 623 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 GJD2Q9UKL4 321 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 PCDHB13Q9Y5F0 798 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 N4BP3O15049 544 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 CALUO43852 315 aaPredicted RBP14.32□□□□□ -0.12
CCDC7-202ENST00000302316 MAPTP10636 758 aaKnown RBP14.32□□□□□ -0.12
CCDC7-202ENST00000302316 PSMC4P43686 418 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 PEX3P56589 373 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 KCNA1Q09470 495 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 NR1I3Q14994 352 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 PTPN21Q16825 1174 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 OLFML2BQ68BL8 750 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 CCDC186Q7Z3E2 898 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 VSTM4Q8IW00 320 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 PPTC7Q8NI37 304 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 SLC7A3Q8WY07 619 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 SMARCAD1Q9H4L7 1026 aa14.32□□□□□ -0.12
CCDC7-202ENST00000302316 TYW1Q9NV66 732 aaKnown RBP14.32□□□□□ -0.12
CCDC7-202ENST00000302316 LRRC10BA6NIK2 292 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 PDXKO00764 312 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 NKRFO15226 690 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCDC7-202ENST00000302316 TPM2P07951 284 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 CYP2C19P33261 490 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 MTIF2P46199 727 aaKnown RBP14.31□□□□□ -0.12
CCDC7-202ENST00000302316 SOX10P56693 466 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 LACTBP83111 547 aaPredicted RBP14.31□□□□□ -0.12
CCDC7-202ENST00000302316 DMP1Q13316 513 aaPredicted RBP14.31□□□□□ -0.12
CCDC7-202ENST00000302316 ALCAMQ13740 583 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 EDRF1Q3B7T1 1238 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 IQSEC1Q6DN90 963 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 KSR1Q8IVT5 923 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 ATP8B4Q8TF62 1192 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 AFG1LQ8WV93 481 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 BBXQ8WY36 941 aaPredicted RBP14.31□□□□□ -0.12
CCDC7-202ENST00000302316 ARHGAP39Q9C0H5 1083 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 PDLIM7Q9NR12 457 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 TRAF3IP3Q9Y228 551 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 ZMYM2Q9UBW7 1377 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 MGAMO43451 1857 aa14.31□□□□□ -0.12
CCDC7-202ENST00000302316 PES1O00541 588 aaKnown RBP14.3□□□□□ -0.12
CCDC7-202ENST00000302316 TEX33O43247 280 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 PPP1R37O75864 691 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 PRKCSHP14314 528 aaPredicted RBP14.3□□□□□ -0.12
CCDC7-202ENST00000302316 RFC5P40937 340 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 SLC26A2P50443 739 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 TNFAIP2Q03169 654 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 IRF5Q13568 498 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms