RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 DNAJC25-GNG10A0A024R161 153 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 DKC1O60832 514 aaKnown RBP eCLIP24.51■■□□□ 1.51
SMAD1-201ENST00000302085 ATG7O95352 703 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 SUPT20HL2P0C7V6 817 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 CASP4P49662 377 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 ERVK-9P63128 1117 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 IQCDQ96DY2 449 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 MMP19Q99542 508 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 MMRN2Q9H8L6 949 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 GBA2Q9HCG7 927 aaPredicted RBP24.51■■□□□ 1.51
SMAD1-201ENST00000302085 CETPP11597 493 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 FKBP1BP68106 108 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 ZNF592Q92610 1267 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 MROH8Q9H579 483 aa24.51■■□□□ 1.51
SMAD1-201ENST00000302085 FAM207AQ9NSI2 230 aaPredicted RBP24.51■■□□□ 1.51
SMAD1-201ENST00000302085 ARMCX3Q9UH62 379 aaPredicted RBP24.51■■□□□ 1.51
SMAD1-201ENST00000302085 SYNGAP1Q96PV0 1343 aa24.5■■□□□ 1.51
SMAD1-201ENST00000302085 K7ENM7 598 aa24.5■■□□□ 1.51
SMAD1-201ENST00000302085 KIF2AO00139 706 aaPredicted RBP24.5■■□□□ 1.51
SMAD1-201ENST00000302085 SLC16A3O15427 465 aaKnown RBP24.5■■□□□ 1.51
SMAD1-201ENST00000302085 UBA1P22314 1058 aaKnown RBP24.5■■□□□ 1.51
SMAD1-201ENST00000302085 MKRN3Q13064 507 aaKnown RBP24.5■■□□□ 1.51
SMAD1-201ENST00000302085 KCTD2Q14681 263 aa24.5■■□□□ 1.51
SMAD1-201ENST00000302085 ZNF526Q8TF50 670 aaPredicted RBP24.5■■□□□ 1.51
SMAD1-201ENST00000302085 CEP170P1Q96L14 293 aa24.5■■□□□ 1.51
SMAD1-201ENST00000302085 DRC1Q96MC2 740 aa24.5■■□□□ 1.51
SMAD1-201ENST00000302085 FAM102BQ5T8I3 360 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 TRIM65Q6PJ69 517 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 GBP3Q9H0R5 595 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 DMAC2Q9NW81 257 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 PNMA3Q9UL41 463 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 BTBD19C9JJ37 291 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 PDHXO00330 501 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 GTF2A2P52657 109 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 PRKCEQ02156 737 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 KCNH2Q12809 1159 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 MEA1Q16626 185 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 TSR1Q2NL82 804 aaKnown RBP24.49■■□□□ 1.51
SMAD1-201ENST00000302085 EEPD1Q7L9B9 569 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 SHCBP1Q8NEM2 672 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 BORCS6Q96GS4 357 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 PORCNQ9H237 461 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 PDLIM7Q9NR12 457 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 AGPAT3Q9NRZ7 376 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 PAXBP1Q9Y5B6 917 aa24.49■■□□□ 1.51
SMAD1-201ENST00000302085 IGSF9BQ9UPX0 1349 aa24.48■■□□□ 1.51
SMAD1-201ENST00000302085 CCDC175P0C221 793 aa24.48■■□□□ 1.51
SMAD1-201ENST00000302085 ATP4AP20648 1035 aa24.48■■□□□ 1.51
SMAD1-201ENST00000302085 WDR78Q5VTH9 848 aa24.48■■□□□ 1.51
SMAD1-201ENST00000302085 BRI3BPQ8WY22 251 aa24.48■■□□□ 1.51
SMAD1-201ENST00000302085 METTL14Q9HCE5 456 aaKnown RBP24.48■■□□□ 1.51
SMAD1-201ENST00000302085 CCL15-CCL14A0A0B4J2E2 113 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 FARP2O94887 1054 aaPredicted RBP24.47■■□□□ 1.51
SMAD1-201ENST00000302085 PEX3P56589 373 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 ALCAMQ13740 583 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 CCL15Q16663 113 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 HS2ST1Q7LGA3 356 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 ZNF397Q8NF99 534 aaPredicted RBP24.47■■□□□ 1.51
SMAD1-201ENST00000302085 ST6GALNAC4Q9H4F1 302 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 EFCC1Q9HA90 598 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 SLC45A1Q9Y2W3 748 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 MAFBQ9Y5Q3 323 aaPredicted RBP24.47■■□□□ 1.51
SMAD1-201ENST00000302085 GSTTP1A0A1W2PQM5 241 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 CELF2O95319 508 aaKnown RBP24.47■■□□□ 1.51
SMAD1-201ENST00000302085 TGFB3P10600 412 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 EPB41P11171 864 aaKnown RBP24.47■■□□□ 1.51
SMAD1-201ENST00000302085 XKR3Q5GH77 459 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 HAUS6Q7Z4H7 955 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 SYCP3Q8IZU3 236 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 C2orf69Q8N8R5 385 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 GTF3C2Q8WUA4 911 aaPredicted RBP24.47■■□□□ 1.51
SMAD1-201ENST00000302085 ZNF302Q9NR11 478 aa24.47■■□□□ 1.51
SMAD1-201ENST00000302085 IGKV6D-21A0A0A0MT36 114 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 GOLGA6L9A6NEM1 432 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 SLC16A4O15374 487 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 NOL4O94818 638 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 TUBB4AP04350 444 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 NCKAP1LP55160 1127 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 GTF2BQ00403 316 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 SYT10Q6XYQ8 523 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 GPRC5AQ8NFJ5 357 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 NEK11Q8NG66 645 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 ACCSQ96QU6 501 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 CRACR2AQ9BSW2 395 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 CYP26B1Q9NR63 512 aa24.46■■□□□ 1.51
SMAD1-201ENST00000302085 SEPT9Q9UHD8 586 aaPredicted RBP24.46■■□□□ 1.51
SMAD1-201ENST00000302085 LRRC37A2A6NM11 1700 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 A0A0U1RQJ8 604 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 RIOK3O14730 519 aaKnown RBP24.45■■□□□ 1.51
SMAD1-201ENST00000302085 PSMC2P35998 433 aaKnown RBP24.45■■□□□ 1.51
SMAD1-201ENST00000302085 SOX10P56693 466 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 ETF1P62495 437 aaKnown RBP24.45■■□□□ 1.51
SMAD1-201ENST00000302085 PPP2R3AQ06190 1150 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 NEDD9Q14511 834 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 LY6KQ17RY6 165 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 ACRBPQ8NEB7 543 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 MYRIPQ8NFW9 859 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 KIF18AQ8NI77 898 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 GOLGA5Q8TBA6 731 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 ATRIPQ8WXE1 791 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms